Musa acuminata (dessert banana): 135583486
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Entry
135583486 CDS
T03447
Name
(RefSeq) structural maintenance of chromosomes protein 3-like isoform X1
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
mus
Musa acuminata (dessert banana)
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mus03036
]
135583486
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
mus00535
]
135583486
Chromosome and associated proteins [BR:
mus03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
135583486
Meiosis-specific proteins
Cohesin complex and associated proteins
135583486
Proteoglycans [BR:
mus00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
135583486
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_23
APG6_N
Motif
Other DBs
NCBI-GeneID:
135583486
NCBI-ProteinID:
XP_009388826
UniProt:
A0A804I3E5
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All DBs
Position
BXJ2-2:29013751..29035130
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AA seq
1204 aa
AA seq
DB search
MHIKKVIIEGFKSYKEEVSTDPFSPKVNCVVGANGSGKTNFFHAIRFVLSDLFQNLRSED
RHALLHEGAGHQVVSAFVEIVFDNSDNRIPVDRDEVRLRRTISLKKDEYFLDGKHVTKTE
VMNLLESAGFSRSNPYYVVQQGKIASLTLMKDSERLDLLKEIGGTRVYEERRRESLKIMQ
ETGNKRKQIDQVVQYLEERLRELDEEKEELRKYQQLDKQRRSLEYTIYDKELNGVRQKLD
EIEESRKKVSEKSTRMHNSVLEAHENLKLLEKESKVLMKELQSLNKEKEDTEKKRTEALK
MHTQIELDLRDLEERIAGEMRSKEEAAKQLESLRKEIQESRDELNTIRPLHQSKVAEEDE
ITKGIMEREKQLSILYQKQGRATQFASKAARDKWLQREIDDLERVLSSNVLQEKKLQEEI
HQLKDEDRRLDMYIRERKTEYEKQELLIAKGQKDSDHLRRQRDELQDTRKSLWNEEANLS
AEIDKLKSELIKAQKSLDHATPGDIRRGLNSVNRIIKDHNIRGVFGPILELIECDPKFFT
AVEVTAGNSLFHVVVETDDISTKIIRYLTAEKGGRVTFIPLNRVKVAHITYPQSSDVVPL
LKKLKFRSDYAPAFSQVFGRTVICRDLDVATSVARNNSLDCITLEGDQVSKKGGMTGGFY
DFRRSKLKFVNMVRQNKMSIHNKTLELDEIGKKLKEIDQEITKLVSEQQKMDAHHGHVKS
ELEQLKNDIANATKQKQSICKALEKKEKLLTNAHNQIDQIQAGIAMKQAEMGTELIDQLT
PEERDLLSRLNPEITELKEKLLACKNNRIEIETRKEELETNLSTNLVRRQQELEGVILSA
DSETLPMEAELKRQELKSSRGSIDKLKKQLEGVLKNIDGLTQKMQDIKTSKESLKMHEDQ
YERTLQDEAKELEQLLSRRNILLTKQDDCMKKIRDLGSLPSDAFDTYKRKNIKELQKLLH
ACNEQLKQFSHVNKKALDQYINFTEQREQLQIRRAELDAGDQKIRELIAVLDQRKDESIE
RTFKGVARHFREVFSELVQGGHGYLVMMKKKDGDLGDDDHGEDGPREPDPEGRVEKYIGV
KVKVSFTGQGETQSMKQLSGGQKTVVALTLIFAIQRCDPAPFYLFDEIDAALDPQYRTAV
GNMIRRLADMANTQFITTTFRPELVKVADKIYGVTHKNRVSHVNVVSKEQALDFIEHDQS
HNAD
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atgcacataaagaaggttatcatcgaaggttttaagagctacaaggaggaggtctcgaca
gatcccttcagccctaaagtaaattgcgttgtgggtgccaatggatctggaaagacaaac
ttctttcatgctatacgatttgtccttagtgatctctttcaaaacctgcgcagtgaagac
aggcatgctcttctccatgagggggcgggccaccaagtggtgtctgcttttgttgagata
gtttttgacaattctgacaaccgcatcccagttgatagagatgaggtgcgtctacggagg
acaataagtcttaaaaaggatgaatatttcctggatgggaagcatgtcacaaagacagaa
gtaatgaatttgctggagagtgctggtttctctcgctcaaatccttattatgtggttcaa
caagggaagatagcttctcttaccttaatgaaggactccgaacgccttgatttattgaag
gagattggtgggacccgtgtgtatgaggagagacggcgtgagagcttgaagattatgcaa
gaaactggtaacaagaggaaacaaattgatcaagttgttcaatatttggaggagagatta
agagaacttgatgaagaaaaagaagagctcagaaaatatcaacagcttgacaagcaacga
aggtcgctagagtataccatatatgacaaggaacttaatggtgtcagacagaaattagac
gagattgaagaatcacgaaagaaagtttctgagaagtcaactaggatgcacaacagtgtg
ctagaagcgcatgagaatcttaagttattagaaaaggagtccaaggttttaatgaaggaa
ttacaaagtttgaacaaggagaaagaagatacagagaaaaaacgaactgaagcattaaaa
atgcacacacagattgaacttgatttaagggatctagaagagagaattgctggagaaatg
cgatcaaaggaagaagctgcaaagcagttggagagcctgaggaaagagattcaggaatct
agagacgaactgaatacaatcaggcccttacaccagtcaaaagtggctgaagaggacgag
atcaccaaaggcataatggagcgtgaaaagcaattgagtattttgtatcagaagcaagga
cgagctacccaatttgctagtaaagctgctcgtgataagtggcttcagagggagattgat
gatcttgagcgtgtgctttcatcaaatgtgttacaggaaaaaaagcttcaggaggaaatt
catcagcttaaagatgaggatagaaggttggatatgtatatacgggaacgaaaaaccgag
tatgaaaagcaagaactgctcatagccaagggccaaaaggattccgatcatttgaggaga
cagagagatgaactacaagatacaaggaaatctttgtggaatgaagaagcgaatctctcg
gctgagattgataagcttaaatcagaacttataaaagcacaaaagagcctggatcatgct
acacctggtgatattagaagaggattgaattctgtgaataggatcatcaaggatcataac
attagaggtgtatttggtccaatactagagttaattgaatgtgatcccaaattcttcact
gctgttgaagttactgctggaaatagcttattccatgtggtcgttgaaacagatgacatt
tcaactaagattattagataccttactgcagagaaaggtggacgtgtaacttttatacca
ctaaacagggtgaaagtcgcacatattacttacccacaaagttctgatgtagtaccactg
ttgaaaaaattgaaatttcgatctgactatgctcctgcattttcacaggtgtttggtaga
actgttatatgtcgcgatttggatgtagccacaagtgttgcaagaaacaatagtcttgat
tgcatcacactagagggtgaccaagtaagcaagaaaggtggtatgactggaggattctat
gacttcagacgttcaaagctaaaatttgtcaacatggttcggcaaaacaagatgtctatc
cacaataaaactttggaattggatgagattgggaaaaagcttaaagagatagaccaggaa
atcaccaagctagttagtgagcaacagaaaatggatgctcaccatggtcatgtcaagtca
gaattggagcagcttaaaaatgacattgctaatgcgactaaacagaagcagtcaatctgt
aaagctcttgaaaaaaaggaaaaattgcttacaaatgcccataaccaaattgatcagata
caagctggtattgcaatgaaacaagctgaaatgggcaccgagcttatcgatcaactaaca
cccgaagaaagggatcttctttcaagattaaatcctgaaattacagaattgaaagagaaa
cttctggcttgtaaaaataatcgaattgagattgagacaagaaaagaggaattggagaca
aatttgtcaacaaacctcgtaaggcgacagcaggagttagaaggcgtcatattgtctgca
gattctgagaccttgcctatggaagctgaattaaaaaggcaggaactgaagagttcaaga
gggtctattgataaactgaaaaagcagctagaaggtgttttgaagaatatcgatggtctc
acacaaaaaatgcaagatataaaaacttcaaaagaaagtctaaagatgcatgaagatcaa
tatgagcgcacacttcaagatgaagctaaagagttggaacaattgttgagcagaaggaat
atccttctcacgaaacaggatgattgcatgaaaaaaatcagggatttgggctcattgcca
tctgatgcctttgatacgtataaaaggaaaaatattaaagaattgcagaaattacttcat
gcatgcaatgagcaattaaagcagtttagccatgtcaataagaaggcccttgaccaatat
attaacttcacagagcagcgtgaacaactacagataagacgagctgaacttgatgctggt
gatcagaaaatcagagagcttattgcagtgttggatcaacggaaggatgaatcgatagaa
aggacattcaaaggtgtggcaagacattttcgagaagtattttctgagcttgtgcaaggt
ggccatggctacttggttatgatgaagaaaaaggatggtgatctcggtgatgatgatcat
ggcgaggatggacctcgtgaaccagatcccgaaggaagggttgaaaagtatattggtgtc
aaagtgaaggtttcctttactggtcaaggagaaacccaatccatgaagcaactttctggt
ggtcagaaaactgtagtagcgctgactctgatctttgctatccagcggtgtgatcctgct
ccattttatttgtttgacgagattgatgcagcattagacccccagtacagaactgctgtt
ggaaatatgatccgccgtcttgctgacatggcaaatacccagttcataactaccacgttc
aggccagagcttgtgaaagttgctgacaagatctatggcgtgacgcataagaacagagtg
agccatgtgaatgtggtctccaaggagcaggctcttgatttcatcgagcatgaccagtcg
cacaatgctgactga
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integrated database retrieval system
