Musa acuminata (dessert banana): 135585406
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Entry
135585406 CDS
T03447
Name
(RefSeq) nuclear pore complex protein NUP98A-like isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
135585406
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mus03019
]
135585406
03036 Chromosome and associated proteins [BR:
mus03036
]
135585406
Messenger RNA biogenesis [BR:
mus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
135585406
Chromosome and associated proteins [BR:
mus03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
135585406
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
135585406
NCBI-ProteinID:
XP_064956843
LinkDB
All DBs
Position
BXJ2-3:39585753..39597091
Genome browser
AA seq
1033 aa
AA seq
DB search
MFGSTNPFAQPSSPFGSQSMFGQTSTSSTNPFSPKPFGSPNPFGSQTGSSIFGSTSTGVF
GQPSTPAFGASPSPAFGSPMPAFGASSTPAFGSSSSSFGGPSLFGQKPAFGSFGSSSSLS
SPFGSTFQQTQPAYGSNLFGSTSPFGASSQPAFGATTTPAFGSVTTPSFGATTSPAFGAP
SMPAFGTTTPSFGSTSAPLFGTTGTSFGASSSPAFGSTMTPSFGTPTTPVFGSSSTPAFG
ASTAPTFGSPTVSAFGVSSAPSFSFGSTASFGQSASAFGSTPFGVSPSPFGVQSSPFGAQ
AMTPTFGSPGFGQSAFGVQPGGTRVAAYSPTPDIDGGTGSQPAGKLESVSAMPAYKDKSQ
EELRWEDYQRGDKGGPNPSGQPVGPLSFSSPSQPSPFGSTGAFHQSAANPFSSTAPSNPF
VIKPPSFASSGFGSTSTSLFSSPFTTSSSSPFGSTSSTASLFGAPTGSAFGASSASSPFG
GATTSAFGSTSLFGSSLSGSSSAFGTGLAFGNTQPSGLFQSSVSPFGQTSSPFGPSTGFQ
QTSSAFGSNLFSTQSTGFGGSLFSSSTPSLFPSSTPAGFGQTAPSLQTPFQSVPVAPTSS
SFSFANFGQAYPTSSGGFGGISNIFNQGIFGQSASSQSNMVMQPAPVANPFGTLPAMPQM
SIGRLGSTPSIQYGISSMPVADKPLPVRTSPLVVPRHRSQRSIRLPPRKYSPKTDGPRQV
PFFSDDEDTLSTPKADALFIPRENPRSLIIHPKEQWPSRSSLGKESILKGGPINTANENG
NVSEKPFAPTFKEPYAGDNDERGAENGHTREQIDMVMPLTEPLHETNRTDDDQLPKGTDS
SYVKIYGQRPGEAATAYKHDAGMEALVPKLRHADYYTQPSIQELAAKELAEPGFCCHVRD
FVVGRHGYGSIKFYGETDVRQLDLESIIQFNNREVIVYGDDSRKPPVGQGLNKPAEITLL
NVKCMNKRTGQQYTEGPKVEKYKEMLTQKTQEQGAEFISFDPIKGEWKFKVIHFSCYGFL
VDTEICRNRAGRS
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atgttcggctccaccaaccctttcgctcagccttctagtccatttggttcccagtcaatg
tttgggcaaacaagcaccagtagcactaatccgttttcccccaaaccgtttggaagtcca
aatccttttggttcacagacagggagttcgatatttggtagcacatctactggtgtcttt
ggacagccttctacacctgcatttggtgcttctccgtctccggcttttgggagtcccatg
cctgcttttggggcatcgtccactcctgcatttggcagttcttcctcttcctttggtggt
ccttctttgtttgggcagaagccagcttttgggagctttgggtcatcttccagtctatca
agtccttttggtagtacatttcagcagacacaaccagcatatgggagcaacctctttggt
tctacctcaccatttggtgcatctagtcaacctgcatttggtgctactactaccccagct
tttggctctgtgaccaccccttcttttggtgccacaacttcaccagcatttggtgcccca
agcatgcccgcatttggtactacaactccttcatttggctcaacatcggcaccacttttt
ggtaccacaggaacttcttttggggcttcaagttccccagcgtttggttcaacaatgaca
ccatcttttggaactccaactacccctgtgtttggatcttcaagtacaccagcatttggt
gcatctactgctcccacgtttgggtctcctacggtttctgcttttggtgtatccagtgct
ccttctttcagttttggttccaccgcttcctttggccagtcagcatctgcatttggaagt
acaccatttggagtgtcaccatctccttttggtgttcagagttccccatttggtgctcag
gcgatgacaccaacatttggtagcccaggttttggacagtcagcatttggggttcaacct
ggaggaacaagagttgcagcatacagtccaacacctgacattgatggtggcactggtagt
cagcctgctggcaagctggaatcagtatcggcgatgcctgcatataaggataagagtcaa
gaggaattacgatgggaagactatcaacgtggtgacaaagggggcccaaatccttctgga
cagcctgtagggccactcagtttttcttctccatctcaacccagcccttttggttcaacc
ggtgcatttcaccaatctgctgcgaaccccttttcctccacagcaccttccaatcctttt
gttattaaacctcctagttttgcttcatctggatttggttctacatctacttcacttttt
agctcaccattcactacatcctcatcaagcccttttggttccacttcttccacggcttca
ctgtttggtgcccctactggttctgcatttggtgcaagttcagcatcctcaccttttggt
ggagcaacaacttctgcctttggttcaacttcactttttggctcctcattatcagggtca
agttctgcttttgggaccggcctggcctttggcaacactcaaccgtctgggttattccag
tcttctgtttcaccctttggtcagacatcatcaccttttgggccaagtactggatttcag
caaacctcctctgcttttggatcaaatcttttcagcactcaatccactggttttgggggg
agtttattcagcagttcaacaccgtcactgtttccttcaagtactcctgctggatttggt
caaacagctccttctctgcagacaccttttcaatcggtaccggtagctccaacatcaagt
tcattttcttttgccaactttggtcaggcatatccaacctcttctggtggctttggtggc
atttcaaatatcttcaatcaaggcatctttggacagtctgcttctagtcaatccaatatg
gtcatgcaaccagcacctgttgcaaatcctttcggaacacttccagcaatgcctcagatg
tcaattggtcgtttgggctccaccccttcaattcaatatggaatttctagcatgcctgtt
gccgataagcctcttccagtaagaacttctccattggtggttcctagacacagatctcaa
agaagcattaggctacctccaaggaaatattctcctaaaactgatggcccaaggcaggtg
ccttttttttctgatgatgaagacacactttcaacacccaaggcagatgcacttttcatt
cccagagaaaaccctaggtcactgattattcacccaaaggagcaatggccttcacgaagc
agtttgggaaaagaaagtatcttaaaaggtggaccaattaatactgctaatgaaaatggt
aatgtatcagaaaagccatttgctccaacttttaaagaaccatatgcaggtgacaatgat
gaacgtggtgctgagaacggtcacacaagggagcaaattgacatggttatgccacttaca
gagcctttgcatgagacaaatagaaccgatgatgatcagctgccgaagggaacagactct
tcatatgtgaaaatatatgggcagaggcctggtgaggctgcaactgcatacaagcacgat
gcaggcatggaagctctcgtgcccaaacttcgccatgctgattactatacccaacctagc
atccaggaactggctgcaaaagaacttgcagaaccaggcttctgctgccatgtcagagat
tttgtggttggcaggcacgggtatggcagcatcaagttttatggagaaaccgacgtaaga
cagcttgacttggagtcaatcatccagttcaacaaccgtgaagtgattgtttacggtgat
gacagcaggaagcctccggttgggcagggtcttaacaagccggctgagataactcttttg
aatgtcaagtgcatgaacaagaggacagggcagcagtatacagaaggccccaaggtcgag
aagtacaaggaaatgttgacacagaaaactcaagaacagggggccgagttcatatcgttt
gatcctatcaagggggagtggaagttcaaggtcattcacttcagctgttatgggtttttg
gtagataccgagatatgtaggaatcgtgcaggtcgttcctag
DBGET
integrated database retrieval system
