Musa acuminata (dessert banana): 135585622
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Entry
135585622 CDS
T03447
Name
(RefSeq) SWI/SNF complex subunit SWI3D-like isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
135585622
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mus03021
]
135585622
03036 Chromosome and associated proteins [BR:
mus03036
]
135585622
Transcription machinery [BR:
mus03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
135585622
Chromosome and associated proteins [BR:
mus03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
135585622
PBAF complex
135585622
GBAF(ncBAF) complex
135585622
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
ZZ
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
135585622
NCBI-ProteinID:
XP_009394308
UniProt:
A0A804III7
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All DBs
Position
BXJ2-3:43553575..43560489
Genome browser
AA seq
965 aa
AA seq
DB search
MMSALSLTAVRSIWERPMETRGRDVPPGPANAEASPAAQPPAPETLTEAPRRRASGAKRK
AHTLSSFAGTSFSAPPKRQAKERNLLHHVFPVHNGPCTRARQSPHKVAAAATHKPTDHVA
VPAWATETKAKDVSADGGQIKAEEEEVSEEPLVDVEFEAIRSRGASVHAVPTPAGWFSWN
IIHPVEKHMLPSFFDGKSENWTSEVYMEIRNSIMKKFHSNPQKQVELKDFSELSVGDANA
RKEVLEFLDHWGLINFHPFPPSIPEASKSDADDTVKTSSLVDKLYQFETIQSFLRIKEEP
LVPAAPPCLLPESALTDDLVRPVGPSVEYHCNSCSADCSRKRYHCQKQADFDLCTDCYNE
GKFGSGMLPADFILMESAEVPGLSGGSWTDQETLLLLEALELFGENWNEIAEHVATKTKA
QCILHFLQMPIEDSFLEGDDDDNDDNLDSKNQTSSNKESTATNTSKLMESDKKEVKEDEE
RSPADALEAETKKFESSENIDERITSKTDPLVNKSTDDEHIFQENGASFAIDALKAAFQA
VGYFPEQGLGSFAEAGNPVMALAAFLSGVVESDSLITSCRSSLKAISEDSPGIQLATRHC
FVLEDPPTDSKDPSLCVSPDIETSNAGIHKDESKMSILDTTDKSEEQNNIAASTENDGNS
SSLLQDSSPKETDVEEVNDATPKKAVLATVQESVDQSLSGDQCMASNAKGVTGASLPVEP
MPNVMKETEDLAFHGEVTKSKKAKEVSCPNSVDQKSNSMRSSDDLASTDRVQQHADSTKA
VDKIRTSVISEEQVRVQTGGSTVETKDKAVEGERKDSCNNDEKIFNPTAVDDDLKIDRLK
RAAVTALSAAAVKAKLLAKLEEDEIRKLVSLIIEKQLHKLEVKLAFLTDIESVVFRMREQ
TEKARHRLMLERSQIIAARLGAAPASLHRGNPSSLPINRLAMGYGATGLKPLNMASRNPP
PVRRP
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctgcgctctccttgaccgccgtgaggtcaatctgggaaaggccgatggagacg
agaggccgcgatgtacccccaggtccggcgaacgccgaggcgtcgcccgcggcgcagcca
ccagcgcccgaaaccctaaccgaagctcctcggaggagagccagcggtgccaagaggaaa
gcccatactctgtcctctttcgccggtacctccttctccgcccccccgaagcgccaggcc
aaggagaggaacctcctccaccatgtcttccccgttcacaacggcccctgcaccagagct
cggcaatcgcctcacaaggtcgcggccgccgccactcataagcctaccgatcatgttgcg
gtgcccgcgtgggccacggagactaaggcaaaggacgtctcggccgacggaggacagatc
aaggcggaggaagaggaggtgtctgaggagccgctcgtggatgtggagtttgaggccatt
cgatctcgaggtgccagcgttcatgctgtccctactcctgccggatggttctcatggaat
ataattcatcctgtggagaagcatatgttgccttctttttttgatgggaagtctgaaaac
tggacatctgaagtgtacatggaaattcggaattccatcatgaagaaatttcattccaac
ccgcagaagcaggtggaactcaaagatttctcagagctgtctgtgggagatgcaaatgcg
aggaaagaagtcctggaattcttggaccactggggtctgatcaattttcatccttttcca
ccatccatacccgaagcaagcaaatctgatgctgatgacacagttaaaacatcatctttg
gtcgataagttgtaccaatttgaaacaattcagtcctttctcagaattaaagaagagccc
ttggtacctgctgcaccaccttgcttgctaccagagtctgccctaactgatgatttggtt
aggccagttggtccttctgttgagtaccattgcaactcttgctcagctgattgctctaga
aagcgttaccattgccaaaagcaggcagattttgatttgtgcactgattgctacaacgag
gggaagtttggatcaggcatgttaccagctgattttatccttatggaatctgcagaggtt
cctggtttaagtggtgggagttggacagatcaggaaactctgcttctactagaagccttg
gaactttttggggagaactggaatgagattgctgaacatgttgcaacaaaaaccaaagcc
caatgcatcttacattttcttcaaatgccgattgaggattctttcttagaaggcgatgat
gatgataatgacgataacctggatagcaagaatcagacttcatcaaataaagaatcaaca
gccacaaatacttctaaattgatggaatctgacaagaaagaagtaaaggaggatgaggaa
cgctctcctgcagatgctcttgaggctgaaacaaaaaaatttgaaagttctgaaaatata
gatgaacgtataacttccaaaacagatcctttggttaataagagtacggatgacgaacat
attttccaagaaaatggggccagttttgctatcgatgcactgaaggctgcatttcaggct
gttggatactttcctgaacaaggattgggttcatttgcagaagcaggaaatccagtcatg
gcacttgcagcattcttatcaggtgttgtagaatctgattctcttatcacctcatgccgc
agttccctgaaagccatatcagaggattcacctggcatccagcttgctaccaggcattgt
tttgttcttgaagatccaccaactgatagtaaggatccatctctctgtgtgagtcctgat
attgaaacaagcaatgcggggattcataaggatgaaagcaaaatgtcaattttagatacc
accgacaaatcagaggagcagaacaatattgctgcctctacggagaatgatgggaactca
tccagtttgttgcaagattcttcaccaaaagaaactgatgtggaagaagtaaatgatgcg
actccaaagaaggcagtgctcgctactgttcaggaatctgttgatcagtctttgtctggg
gaccagtgtatggctagtaacgcgaagggtgtaactggtgcttctttgcctgtagaacct
atgcccaacgttatgaaagaaactgaagatttagcttttcatggtgaagttacaaagagt
aagaaggcaaaggaagttagttgtcccaactcagtggatcagaaatcaaatagtatgaga
agttcagatgatctagcttcaacagacagggtccaacagcatgcagattctacaaaggct
gtagataagatacgtacttcagttatctcagaagaacaagtgcgcgtgcaaacaggtggt
tcaactgttgaaactaaagacaaagcagttgagggtgagagaaaagattcatgcaacaat
gatgagaaaattttcaacccaactgcagttgatgatgatcttaagatagataggttgaaa
cgtgctgcagttactgcactctcagctgctgctgtgaaggctaagcttcttgccaagctg
gaagaagatgaaattcggaaactcgtttctttgattattgaaaagcagttgcataagttg
gaggtgaagttggcatttctcaccgacatagaaagtgtcgtcttcaggatgagagaacaa
acagagaaagcaagacacagacttatgcttgagcgttcacagataattgctgctagactt
ggtgcagcacccgcttccctacacagaggcaacccatcttccttaccaataaacagatta
gccatgggatacggcgcaactggtctaaagccacttaacatggcatcgcggaatccacca
cctgtaaggaggccatga
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