Musa acuminata (dessert banana): 135585632
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Entry
135585632 CDS
T03447
Name
(RefSeq) protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1-like isoform X4
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
135585632
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mus03036
]
135585632
Chromosome and associated proteins [BR:
mus03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
135585632
SWR1 complex
135585632
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Myb_DNA-bind_6
Myb_DNA-binding
HDA2-3
AAA_14
Motif
Other DBs
NCBI-GeneID:
135585632
NCBI-ProteinID:
XP_009392916
UniProt:
A0A804IH13
LinkDB
All DBs
Position
BXJ2-3:40828386..40850711
Genome browser
AA seq
1706 aa
AA seq
DB search
MKHSTLGPSDDLDDRDYTAASEEKDDETTLSEEEELAKKEEVNPLEEIKSLKEESEMPVE
ELLARYNKDLCIDDGMKKSDFSSSSTDDQLENKTQNLKMIDGEYQEDKSPYQNELDSSVY
KEIKTDCDNIMDGRESEIIIADAAAAARSAQPTGNTFSTTKVRTKFPFLLKHPLREYQHI
GLDWLVTMYEKRLNGILADEMGLGKTIMTIALLAHLACDKGIWGPHLIVVPTSVMLNWET
EFLKWCPAFKILTYFGSAKERKLKRQGWLKPNYFHICITTYRLVIQDSKVFKRKKWKYLI
LDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHIFQSHQEFK
DWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVEKQLPKKHEHVIYCRLSRR
QRNLYEDFIASSETQATLASSNFFGMISVIMQLRKVCNHPDLFEGRPIVSSFDMAGMDMQ
LSSSICTIFSSSPFSKVDLCGLNFVFTQNDYCMTSWVKDEVNSIACPPNLIQRTWLEASG
SLSFFQSRYELKRKIHGTNIFEEIQKALWEERVKHVKERAMSVAWWNSLQCQKKPVYGTD
LRKLVTIKHPVFDILEQKNNPSCYMNFSSRLADIVLSPIERFQKILDLVECFMFAIPASR
APFPVCWCSKGRSPVFLQPAYKEKCREVFAPLLSAIRPAIVRRQVYFPDRRLIQFDCGKL
QELAILLRRLKAEGHRALIFTQMTKMLDILEAFINLYGFTYMRLDGSTQPEERQTLMQRF
NTNPKYFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYR
LISESTIEENILKKANQKRALDDLVIQSGSYNMEFFKKLDPMELFSGHRSLRIESLQKGN
SSTADCSANGMDALLSNADVEAAIKQAEDEADYMALKKLEQEEAVDNQEFTEDIIGRSED
DEPVNEDETKLDEKVAEEQNCCTSVSKENDVILCSSNMCEQKSLALGGEDEDMDMLADVK
QMAAAAAAAGQASSSFENQLRPIDRYAMRFLELWDPIVDKSAIEYQAIVEEQEWELDRIE
KFKDELEAEIDEDQEPFLYERWDADFATTAYRQHVEALAQQQLLEELECEAQLADDADDE
NDAFKNGTLDERKPKTKKKMKKTKFKSLKKGPLASDMEVVHEEPSLDDISVDDKVLSPDI
ISAGSPTRSPPRKKRKKVFAPSEDEENNLRKSIKKLKKASHSNHVVDFNKYGKHTMEATE
LKLGDGATESDLRPASRTKSGGKISIAYVPVKRVIMVKPERFRKRGPVWSKDCFPAPDIW
SSQEDALLCAIVHEYGTNWSFISDTLNDIPCGGSYRGRFRHPVHCCERFRELFFKYVLSA
MDSSNTEKITSSGSGKALLKVTEDQIRVLLNVTSELPDNELLLQKHFLAILSSVWRANCL
LESYRSRTSSKINFCSNRRFSDSCGKSQRLTGKMNLASSRQSSKLVSTALTDVYKNHEDS
AIVSNELGSQSVVDHVNLMLDFPSDEVNYDSVFPSTISLSIHVPELPQAANEPPGQFLLA
ESSCGIAENRFRLASEACFEGDSCGWASSAFPSSDTNRYRCGLKSQSLGKHKSGSDIIKP
SKLKIQRTTEVQEDPSLVSKYVAQPRPTTLMESFDILDTGCDHSQWHAMDALEEPQFVDI
VPHAYDPNFFSGLEEMEPLQDITDVG
NT seq
5121 nt
NT seq
+upstream
nt +downstream
nt
atgaaacattcaacccttggtccaagtgatgacttggatgatagagattacactgctgca
agtgaggagaaggatgatgagacaacattgtctgaagaggaagagttggcaaagaaggaa
gaagtcaatccgcttgaggagataaagtcactgaaagaagagagtgaaatgcccgtagaa
gaactgcttgcaaggtacaacaaggatttatgcattgacgatgggatgaagaaatctgat
ttttcttcctcaagcactgatgatcagctggagaacaaaactcaaaacctcaaaatgatt
gatggtgaatatcaagaggacaaatctccatatcaaaatgaattggattcttctgtttat
aaagagataaaaacggattgtgataacataatggatgggagggagagtgagattatcatt
gccgatgcagcagctgctgcaagatcagcacagccgactggaaacactttctcaacaaca
aaagtgcggacaaagttccctttccttctgaagcatcctctccgtgaataccaacacatt
ggtctagattggctggtaacaatgtatgaaaagaggctaaatggaattctagcagatgaa
atgggcttagggaagacaatcatgaccattgctcttcttgctcacctagcttgtgacaag
ggaatatgggggcctcatctcatagtggtaccaactagtgtcatgctcaattgggagact
gaattccttaaatggtgtcctgcattcaaaatactaacgtactttgggagtgcaaaggaa
cggaagcttaaacgacagggttggttaaaacctaattactttcacatttgcattactact
tacaggcttgttattcaggattcaaaagtatttaagagaaagaaatggaaatacctcatt
ctggacgaagcacacttgataaagaactggaaatctcagaggtggcagactctactgaat
tttaactcaaaacggcgaattctgttgactggaacacccttgcagaacgaccttatggaa
ctttggtctttgatgcatttcttaatgcctcatatttttcagtctcatcaagaatttaaa
gactggttttgcaacccaatttcggggatggtggagggccaggagaaagttaacaaagaa
gttgttgaccggttgcataatgtgcttcgtcctttcatattaagacgtttaaaaagggat
gtggaaaaacaactcccaaagaagcatgaacatgtcatatactgtaggctttccagaagg
cagcgaaatttgtatgaagattttattgccagctcagaaactcaagcaacattagcgagt
tcaaattttttcgggatgattagtgttataatgcaacttcgtaaagtttgtaaccatcca
gatctttttgaaggccgtccaattgtaagttcatttgacatggctggtatggacatgcaa
ttgagctcttctatttgtacaatcttttcttccagcccattttcaaaagttgatctctgt
ggcttaaattttgtatttacacaaaatgattattgtatgacttcatgggtgaaggatgaa
gtcaactcaattgcttgtcccccaaatttaatccagcgtacttggcttgaggcttctggc
agtctttcttttttccaaagtagatatgagctgaagagaaaaattcatggaactaacata
tttgaagagattcagaaggccctttgggaggaaagagtgaaacatgttaaagaaagagcc
atgtccgttgcatggtggaattccttgcagtgccagaagaagcccgtatatggaactgat
ctgaggaagcttgtcacaataaaacatccggtctttgacattcttgagcaaaagaataat
ccttcatgttacatgaacttttcatcgagactggcagatatagttctttcacccattgaa
cgctttcagaagattcttgatctagttgaatgtttcatgtttgcaattcctgcttcgcgt
gccccctttcctgtttgctggtgcagtaaaggtagatctcctgtttttctgcaaccagca
tacaaggaaaaatgccgagaggtctttgcacctttattatcagctattaggccagccatt
gttcggagacaagtttattttcctgacagacgtctaatacagtttgactgtggaaagcta
caggagcttgcaatattgctaagacgattgaaagcagaaggccacagggctctaattttt
actcagatgacaaagatgcttgatatcttggaggctttcattaatttgtatgggttcacc
tacatgcgactagatggatctacacagccagaagagagacagacactgatgcagcgtttt
aacacaaatccaaaatacttcctgtttattttgtccacacgtagcggtggtgtggggatc
aacctagttggtgccgatacagtcattttttatgatagtgactggaatcccgcgatggac
caacaagctcaagatagatgccatagaattgggcagacaagggaagtgcacatttatcga
cttatcagtgagagtaccattgaggaaaacatcttgaagaaagcaaaccagaagcgtgca
cttgatgatttggttatacagagtggtagttacaatatggagttctttaaaaagcttgat
ccaatggaattgttctctggccatagaagtctcagaattgaaagtttgcagaaaggaaac
tctagcactgctgactgttctgctaatgggatggatgccctattatccaatgcagatgtt
gaagcagctattaaacaagcagaagatgaagcagattatatggccctgaaaaagttagaa
caagaagaggctgttgataatcaagaattcactgaagatatcattggaagatcagaggat
gatgagcctgttaatgaggatgagaccaagcttgatgagaaagttgctgaagagcagaat
tgctgcacttcagttagcaaggaaaatgacgttatcttatgcagcagtaatatgtgcgaa
caaaagtctcttgcattaggtggggaagatgaagatatggacatgcttgctgatgttaag
cagatggctgcagcagcagcagcagctggacaagcaagttcatcttttgaaaatcagctt
cgtccaattgacagatacgcgatgcgttttctggaactttgggatcctatagttgacaaa
tctgcaatagagtatcaggcaattgtagaagagcaagaatgggagcttgatcgaattgag
aaatttaaagatgaactagaagctgaaattgatgaagatcaagagccattcttatatgaa
agatgggatgccgattttgcaaccacagcatatcgccagcatgttgaagcattagctcaa
cagcagttgttggaagaactagaatgtgaagcacagttagcggatgatgcagatgatgag
aatgatgctttcaagaatggaacactagatgaacggaagcctaagacaaaaaagaaaatg
aagaagacaaagttcaagtctctgaagaaagggccattagcttcggacatggaagttgtt
catgaggaaccatcactagatgacatatctgttgatgataaagttctttctccagatatt
atctctgctgggtcaccaacacgctcaccacctagaaaaaagcgcaagaaggtttttgct
ccctcagaagatgaagaaaataacttgaggaaaagcattaagaaacttaagaaagcttct
cacagtaaccatgttgttgatttcaacaagtatggtaaacatactatggaagctacagaa
ttgaaacttggagacggagctaccgagtctgatctgagacctgcaagcagaaccaaatct
ggtggaaagatttccatcgcatatgttccagtaaaacgtgtaataatggtgaaaccagaa
aggtttagaaagaggggaccagtttggtcaaaagattgctttcctgctccagatatttgg
tcatctcaggaagatgctttgttgtgcgcaatcgtacatgagtatggcactaattggagc
tttataagtgacacacttaatgatattccttgtggtggatcttacagaggaaggtttcgc
catcctgtccattgttgtgagaggtttcgagaactgttttttaagtatgttctgtctgct
atggacagttctaatacagaaaagattacctcttctggatctggaaaggcacttctaaaa
gtgactgaggatcaaatacgtgtattgctgaatgtgacaagtgagcttcctgataatgaa
ttgcttcttcagaaacatttcttagcaattctttcttctgtatggagagcaaattgtctc
cttgagagttatcgaagcaggacatcttctaaaattaatttctgttcaaataggaggttc
tctgactcttgtggtaagtctcaaagattgactggaaagatgaacttagccagctcgaga
cagtcaagtaagctagtatccacggcccttactgatgtttataagaatcacgaagactca
gcaattgtttccaacgagctaggttcccaatctgtagttgaccatgtgaatctgatgctg
gactttcccagtgatgaagtgaattatgacagtgttttcccctcgaccattagtttatcg
attcatgttccagaactgccacaagcagcaaatgaacctccagggcagtttttactagca
gaatcatcatgcgggattgctgaaaatcggttcaggctggcatcagaagcttgctttgag
ggagatagttgcggatgggcatcatcagcttttccttcatctgataccaacagatacaga
tgtggcttgaagtcgcaatcattaggcaagcacaaatctggatccgatataataaagcct
tccaaattgaaaattcaaagaactacagaagtgcaagaagaccccagtttggttagcaaa
tatgttgcacaacctcgaccaacaacactcatggagtcttttgacattttggacacgggg
tgtgaccattctcagtggcatgccatggatgcacttgaagagccacaatttgtagatatt
gtaccccatgcctatgatccaaacttctttagtggcctcgaggaaatggaaccactgcag
gatatcactgatgttggatga
DBGET
integrated database retrieval system
