Musa acuminata (dessert banana): 135585788
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Entry
135585788 CDS
T03447
Name
(RefSeq) formamidopyrimidine-DNA glycosylase-like isoform X1
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
135585788
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mus03400
]
135585788
Enzymes [BR:
mus01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
135585788
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
135585788
DNA repair and recombination proteins [BR:
mus03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
135585788
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
Fpg-like_C
Phosphoprotein
Motif
Other DBs
NCBI-GeneID:
135585788
NCBI-ProteinID:
XP_064972309
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All DBs
Position
BXJ2-7:4142039..4147866
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AA seq
372 aa
AA seq
DB search
MPELPEVEVARRAIEEHCVGKKITGCSVADDPKVIDGVSRADFESALVGRSIVAALRKGK
NLWLRLDSPPFPTFHFGMAGAVYIKGVALTKYRRAAVNDTDEWPSKYSKVFVKLDDGLEF
SFTDKRRFARVRLLDDPESVPPISELGPDALLELMPVDDFVDSLSKKKIAIKTLLLDQSY
ISGIGNWIVDEVLYQAKLHPLQIASSLSKESCKSLHRCIREVIDKALEVGADSSQFPKDW
IFHSREKKSGKAFVNGKKINFITVGGRTSAYVPELQKLTGNQSKEAPKKKSRKARSDVEE
SESEEDDNNGTSKRSKTTEGVEGQQKKKTSEFKSDSIPSKGTTQKQVQAARGTSKKLSES
TRATTRQKKAKI
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgccggaactcccggaggtggaggtggctcggcgggcgatcgaggagcactgcgtcggg
aagaagatcaccggatgttcggtggccgacgatccgaaggtcatcgatggcgtctcccgt
gctgactttgagtccgccctagtcggtaggagcatcgtcgccgctctccgcaaggggaag
aacctgtggctccgccttgactccccgccctttcccaccttccacttcgggatggcaggt
gcggtctatatcaagggcgtggccttgaccaagtacagaagggctgcggtgaacgataca
gatgaatggccttcgaaatactcgaaggtgtttgtcaaactagatgatgggctggagttt
tcttttactgataagaggcgttttgcccgagttcgcttgcttgatgatccagaatctgta
cctccaatttctgagctagggccagatgccctgttagagcttatgccagttgatgacttt
gtggactcactaagcaaaaagaagattgcaataaagactctcttacttgatcagagttat
atttcaggtatcggtaactggatagtagatgaggtgctttaccaggcgaagcttcatccc
cttcaaattgcttcaagcttgtcaaaagagagttgcaagtcattgcacagatgcatcaga
gaggtaatagacaaggccctggaagttggagctgatagtagtcagttccccaaagattgg
atttttcattctcgtgaaaagaaatctgggaaggcctttgtaaatgggaagaagatcaat
ttcatcacagtaggtggcagaacttcagcatacgttccggagttgcagaagttaaccgga
aatcagtcaaaagaggctccgaaaaagaagtcaagaaaagccaggtccgatgtggaagaa
tcagaaagtgaggaagatgataataatggaacttccaagagaagcaagacaactgaaggc
gtcgaggggcagcaaaagaaaaaaaccagtgagttcaagagcgatagtattccaagcaaa
ggaacgacgcagaaacaagtccaagctgcgagaggcacatcaaagaagctgtcagaatcc
actcgagccaccacacgacagaagaaagcaaaaatatag
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