Musa acuminata (dessert banana): 135586908
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Entry
135586908 CDS
T03447
Name
(RefSeq) autophagy-related protein 16-like
KO
K17890
autophagy-related protein 16-1
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
135586908
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mus04131
]
135586908
03029 Mitochondrial biogenesis [BR:
mus03029
]
135586908
Membrane trafficking [BR:
mus04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
135586908
Others
Specific organelles associated proteins
Auto phagosome
135586908
Mitochondrial biogenesis [BR:
mus03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
135586908
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
ATG16
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
Beta-prop_NWD2_C
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_RIG_2nd
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Beta-prop_RIG_1st
Cytochrom_D1
VID27
Motif
Other DBs
NCBI-GeneID:
135586908
NCBI-ProteinID:
XP_064951665
LinkDB
All DBs
Position
BXJ2-2:complement(23903976..23908252)
Genome browser
AA seq
509 aa
AA seq
DB search
MRRDEVGRAAIKRAIRALRKRHLLEEGAHAPAIKALSRPLVAQGLEWKEKVENLEVELQH
CYKAHAQLSEQLVVEVAECRTSKALVQEKEELIRNLQYDISQAREENLQLKQDLYEKTQA
LDLLTSESQSLKLQHEEIRLKLKKAETENKDLIDRWMLEKMNTAEKLNEANSLYDELMQQ
LKASSSEHIARQQVDGVVRQMEPGYADHVESAIPTSCRHTIHAHDGGCGSILFQHNSDML
ISGGQDRTVKVWDTRSGTLSSTLHGCLGSVLDLAITHDNRSIIAASSSNNLYVWQTSSGQ
VQHTLTGHTDKVCAVDTSKVSSRSVVSAAYDHTMKVWDPVKGYCTSTIIFQSNCNALSYS
MDGLTFCSGHVDGNLRIWDSRMGKAVSEVAAHSQAVTSICVSRSGNLVLTSGRDNLHNLF
DLRTLEVCGTFKANGNRVASNWSRSCISADENFVAAGSADGFIYIWSRVKDNMLSVLEGH
SSPVLSCSWNGMGNTLASADKNGKLCIWC
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgagacgggatgaggtcgggagggcggcgatcaagcgcgccatcagagccctccggaag
cggcatttgctcgaggaaggcgcccacgctccggctattaaggccctctccagacccctt
gtagcccagggattagagtggaaggaaaaagttgaaaaccttgaagtggagttgcaacac
tgttacaaagctcatgcacagttgtctgaacagcttgtggtggaagttgcagagtgcaga
acatctaaagctcttgttcaagagaaagaagaattgatcaggaatttgcaatatgacatc
tctcaagcaagggaagaaaacctacaacttaagcaggatctctatgaaaagacacaagcc
ttggatttgttaacgagtgaaagccagtcacttaaactgcaacatgaggagattagattg
aagttgaaaaaagccgaaactgagaacaaggatttaattgatcgttggatgctggagaag
atgaatactgcagaaaagctgaatgaggctaattcactgtatgacgagctgatgcaacag
ttaaaggcatccagctctgaacatattgcaaggcaacaagttgatggggtggttcgccaa
atggaaccaggatatgcagaccatgtggaatcagcaattccaacttcttgcaggcatact
attcatgcccatgatggtggatgtggatccattctgttccaacacaactcggatatgttg
attagtggcggtcaggaccgaacagtcaaggtttgggatacaagatctgggacgctgagt
tctactcttcatggttgccttgggtcagtacttgatcttgcaattacccatgacaacaga
tctatcattgccgccagcagctccaacaacctatatgtatggcaaactagttctggtcag
gtacagcacactctcactggccacaccgacaaagtatgtgcggtcgacacgagcaaagtt
tccagccgcagtgtagtgagtgctgcttatgatcacaccatgaaggtctgggatccagtg
aaaggctactgcaccagtaccatcatcttccagagcaactgcaatgccctttcatacagc
atggatggactgaccttctgctctggtcatgtagatgggaacctgcgaatatgggacagc
agaatgggaaaagctgtaagtgaagtagctgctcattcgcaggcagtgacatcaatctgt
gtctcgcgaagtggtaacttggtgctgacaagcggcagggataacttgcataacttattc
gacttgagaacactggaagtttgtgggacgttcaaagccaatggaaaccgagtcgcatct
aattggagcaggtcttgtatcagtgccgatgagaactttgtcgcagctggatcagctgat
ggattcatctacatatggtcgagggtaaaggataacatgctaagcgttttagaagggcat
tcttcgccggtcctctcgtgctcatggaatgggatggggaacacactagcttctgctgat
aagaatggaaagttgtgtatatggtgttga
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