Musa acuminata (dessert banana): 135597938
Help
Entry
135597938 CDS
T03447
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
mus
Musa acuminata (dessert banana)
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
135597938
Enzymes [BR:
mus01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
135597938
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
EMC7_beta-sandw
RhgB_N
Motif
Other DBs
NCBI-GeneID:
135597938
NCBI-ProteinID:
XP_064947517
LinkDB
All DBs
Position
BXJ2-1:5903239..5906308
Genome browser
AA seq
605 aa
AA seq
DB search
MEVIDKEDSRGYANIYLYWDLVWNPSDRDSGIYQKVYGTEFEVLKGDANHVEVSFRTQWD
PSNRGKLVPLNIDKRFVMLQGSSGFYTYAIYEHLQGLPDVNLGETRVVFKLRKDKFHYMA
IADNRQRIMPMPDDRGEGRSEKLGYPEAVRLTDPINATLRGEVDDKYQYSCDNKDSMVHG
WISSDPSVGFWVITPSNEFKSGGPVKQDLTSHVGPTALSMFVSSHYSGVDTVPKFRNGEY
WKKVFGPVFIYLNSAPDKSDPKLLWEDAKKQMQVEVGKWPYEFPASEDFHKSEKRGSVSG
RLRVVDKYINKEYINGNSAFVGLASPGEAGSWQRESKGYQFWVRADVDGNFVIKNVRTGV
YNLYAWVPGFIGDYKSSVNITVTSGNHINLGNLVYNPPRDGPTLWEIGIPDRSAAEFFVP
DPDPKYTNRLYVHHPDRFRQYGLWERYADLYPAGDLNYTIGVSDYRKDWFYAQVTRKDGQ
GSYQATTWQIRFRLDSVRRNGPYKLRVALAASHLSELQVRFNNPRVQPAHFTTGLIGRDN
SIARHGIHGLYWLFSIDVESSWLLKGDNIIFLTQTRGQSPFNGVMYDYIRMEAPAGTVAS
TEDVA
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggaagttatcgacaaagaagacagtagagggtatgctaacatatatctgtattgggat
cttgtttggaatccatcagatcgagattctggcatatatcagaaagtatacggaacagaa
tttgaagtattgaagggagatgcaaaccatgttgaggtctctttcagaacacaatgggat
ccctccaaccgaggcaagcttgtgcctttaaacatcgacaaaaggtttgtaatgttgcaa
ggcagctcaggcttctacacctacgccatatatgaacaccttcaaggcttgcctgacgtc
aatctaggagagaccagggtggttttcaagcttcgaaaggacaagtttcactacatggcc
attgcagacaacaggcaaagaatcatgccaatgcctgatgatcgcggggaaggaaggtca
gaaaagttaggataccctgaagcagtccgactcactgatccaatcaatgcaaccttgaga
ggggaggtggatgacaaataccagtattcctgtgataacaaggacagtatggtgcatgga
tggatttcttctgatccttccgtagggttttgggtgatcaccccaagtaatgagtttaag
tcaggagggcctgtgaagcaggatctgacatctcatgttggtcctaccgccctttctatg
ttcgtgagctctcattactccggggtggacactgtgcctaaattcaggaacggagaatac
tggaagaaggtgtttggtcctgtgttcatatatcttaattctgctccggacaaatcggat
ccaaagcttctctgggaagacgccaagaagcagatgcaggttgaagtggggaagtggccg
tacgagtttcctgcttcagaggacttccacaagagcgagaagagaggctctgtttctggt
agactacgtgttgtagacaagtacatcaataaggaatacataaatgggaattctgctttt
gttggtttggcttcaccaggagaagcaggatcttggcagagagaaagcaagggatatcag
ttctgggtgagagcagacgttgacggcaacttcgtcatcaagaacgtaagaactggagtg
tacaacctttacgcatgggttcctggtttcattggggactacaaatctagtgtaaacata
accgtgacgtcaggaaatcacatcaatctgggtaaccttgtgtataatcctccaagagat
gggccaaccttgtgggagatcggcattcccgatcgctccgccgcggagttcttcgtccca
gatcctgatcctaaatataccaacagactctatgtgcatcatcctgataggttcaggcag
tatgggttgtgggagagatacgcagatctgtatcctgctggggatctgaactatacaatt
ggtgtcagtgactacaggaaagactggttctacgcacaagttaccaggaaggatgggcag
ggttcctatcaggcaactacatggcagataaggtttcgactcgatagtgtgcgtcggaat
ggaccttacaagcttcgagtggcgcttgcggcttcccatctatctgagctacaagttcga
ttcaacaacccaagagtgcagcctgcacacttcacgacagggctaattgggagagacaac
tcgatcgcccgacacggaatccatgggttgtactggttgttcagcatcgatgtggagagc
agttggcttcttaaaggcgacaacatcatcttcttaacccagacgcgaggccaaagccct
tttaatggagtcatgtacgattacatccgaatggaagctcccgcaggcactgtcgcaagc
acggaggacgttgcttaa
DBGET
integrated database retrieval system
