Musa acuminata (dessert banana): 135597969
Help
Entry
135597969 CDS
T03447
Name
(RefSeq) probable CCR4-associated factor 1 homolog 11
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135597969
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mus03019
]
135597969
Messenger RNA biogenesis [BR:
mus03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
135597969
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
135597969
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
135597969
NCBI-ProteinID:
XP_064947553
LinkDB
All DBs
Position
BXJ2-1:complement(10019064..10019927)
Genome browser
AA seq
287 aa
AA seq
DB search
MAINVGKANLVEHLELILSLRGSYPIVAIDTEFPGFIRDTPRNATEEERYNDVKHNVDNM
HLIQLGVALFDEGGNTPWPGCCWQFNFSDFDPDVDASSPDSIELLTQSGHDFQQYRRHGI
DARRCAYLVCVKLFCQPYCSKYVTFHGLYDVAFVIKMITRAPLPNTLNEFSDLVRTIFGQ
IYDLKYISRFCGGLRRGEIGLVGLSRLLNFEPVGIRHQAAYDSLLIGALFNEMKQRRHNV
EDDRSASVLYGIENRCVENRRTRRIDRRGWPYARRQQNRLLAMGLAV
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atggccatcaacgtggggaaggcaaaccttgtggagcacttggagctcatcctcagtctc
cgtggctcctacccgatagtggcaatcgatacggagttcccggggttcattcgggacacc
cctcgcaatgccaccgaagaagaaagatacaatgacgtgaagcacaacgtggataacatg
cacctgatccagctgggcgtcgccttgttcgacgaaggcggcaacaccccatggccgggg
tgctgttggcagttcaatttttcggatttcgatcccgatgtggatgcttcctctcccgac
tccatcgagttgttgacacagagcgggcacgacttccagcaataccgacgacacggcatc
gacgcgcggcggtgcgcctatctggtatgcgtgaagctcttctgccaaccctactgctcc
aagtatgttacgtttcacggactctacgacgtggcttttgtgataaagatgatcacccga
gccccactgcccaacaccttgaacgagttctctgatttggtgaggaccatcttcggccag
atttatgatctcaaatatatatctcgattttgtggaggactgcgtcggggagagattggt
ttggtgggactatcaaggttattgaactttgaacccgtagggatccgtcaccaagcagca
tatgacagtctactaattggggcactcttcaacgaaatgaagcaacgaaggcataacgta
gaggacgacagatctgcatcggtcctctatggtatagagaatcgatgcgtcgagaacagg
aggactcgaaggattgaccgcagaggttggccttacgcaagacggcagcaaaaccgcttg
cttgccatggggttggcggtttaa
DBGET
integrated database retrieval system
