Musa acuminata (dessert banana): 135598323
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Entry
135598323 CDS
T03447
Name
(RefSeq) uncharacterized protein LOC135598323 isoform X1
KO
K07573
exosome complex component CSL4
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135598323
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mus03019
]
135598323
Messenger RNA biogenesis [BR:
mus03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
135598323
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
135598323
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
135598323
NCBI-ProteinID:
XP_064947997
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Position
BXJ2-1:complement(855066..862987)
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AA seq
210 aa
AA seq
DB search
MSSMAAGGGEGEDELVTPGELLGDSSGLIAGTGAYVAPNGRSIRASLAGIRRITPPQSDA
ADQRSTVEVVGHKAQGAVPQPGSVVIARVTKVMARMASADIMCVESKAVREKFTGIISVI
NSCCNRQQDVRATEIDKVDMYLSFHPGDIIRALVLSLGDARAYYLSTAKNELGVVSAQSI
AGATMVPISWTEMQCPLTGQVEKRKVAKVD
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcatggcggcaggcggcggcgagggcgaagacgaactcgtcacccctggggag
ctgctcggcgactccagcggactaatcgccggcacgggagcctatgtcgctcccaacggt
cgctctatccgcgcttcccttgccggcatccgccgtataacccctccccaatctgatgct
gccgaccagagatcgaccgtggaagttgtcgggcacaaggcccagggtgctgttccacag
cccggttctgtggttattgctcgagtaacaaaagtgatggcccgtatggcatcagctgat
ataatgtgtgttgagtccaaagctgtgagggaaaagtttactggcataattagtgttatt
aattcttgctgtaacaggcaacaagatgttcgtgcaactgaaattgataaggtggacatg
tacctctcttttcatcctggtgacatcattcgagctcttgttctttctcttggagatgca
agggcatattacctttctactgcaaagaatgaactgggagtagtttctgctcaaagcata
gcaggtgctaccatggttccaatcagttggacggagatgcaatgcccattgactggccaa
gttgagaagagaaaggttgcaaaggttgattag
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