Musa acuminata (dessert banana): 135598478
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Entry
135598478 CDS
T03447
Name
(RefSeq) uncharacterized protein LOC135598478 isoform X1
KO
K12816
pre-mRNA-processing factor 17
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135598478
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mus03041
]
135598478
Spliceosome [BR:
mus03041
]
Complex C
Other components
Step II factors
135598478
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WDR55
EIF3I
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_IFT122_1st
Beta-prop_SPT8
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
WD_LRWD1
eIF2A
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_NWD2_C
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
135598478
NCBI-ProteinID:
XP_064948389
LinkDB
All DBs
Position
BXJ2-1:3586021..3591733
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AA seq
604 aa
AA seq
DB search
MDLLRGYTEGDDDNDGPEEMSRGGGGEGERLESAAATEGEGEAEGSSSPDSSPPRLPAKS
SAPRVDDTTLALAAAESARAIHRPLDPAQHAVAFNPTYDQLWAPIHGPAHPFAKDGVAQG
MRNHKLGFVEDAAIQPFLFDEQYNTFHKYGYATDPSGLSYVGDLETLTKNQALSVYNMPQ
QEQKRRRLQMKAPDAEEADPSAAGPEVENPASDEWLLKNRKSPWSGKNEVVQGELTEEQK
KYAEEHAEKKAEKERGEGRAGNKAEHSDKSTFHGKEERDYQGRSWIEPPKDAKPKNDHCY
IPKRWVHTWSGHTKGVAAIRFFPKHGHLLLSAGMDSKVKIWDVFNSGKCMRTYMGHSKAV
RDISFSIDGTKFLSAGYDKNIKYWDTETGKVISTFSTGKVPYVVKLNPDEDKQNILLAGM
SDKKIVQWDMNSGTITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKY
ISEPHMHSMPSISLHPNSNWLAAQSLDNQILIYSTKERFQLNKKKRFAGHIAAGYACQVN
FSPDGRFVISGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGMI
KYWD
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggatctcctacgaggctacacagaaggcgacgacgacaacgacggacccgaagagatg
tcacgaggaggaggaggagaaggagagaggttggaatccgccgcagcgacggagggggag
ggggaggcggagggctcttcgtcgccggactcttcccctccgcgcctgccagcgaagtcc
tccgccccccgcgtggacgacaccaccctggcccttgccgccgccgaatcggcccgcgcc
atccaccgacccctcgatccggcgcagcatgcggtggccttcaaccccacctacgatcag
ctctgggcgcccatccacggccccgcccaccccttcgccaaggacggcgtcgcccagggc
atgcgcaatcacaagctcggcttcgtggaggacgccgccatccagcctttcctctttgac
gagcagtacaacaccttccacaagtacggctacgccacggacccctccggcctctcctac
gtcggcgacctcgaaaccctaaccaagaaccaggccctctccgtctacaacatgccccag
caggaacagaaacggcggcgcctccagatgaaagcgcccgatgccgaagaagctgaccct
tccgcagcagggcctgaggttgagaaccccgcgtctgacgagtggctcctcaagaatcga
aaaagcccgtggtccgggaagaacgaggtcgtccagggcgagctcacggaggagcagaag
aagtacgccgaggagcacgcggagaagaaggccgagaaggagcgcggagaagggcgggct
ggcaataaagcagagcattcagacaagagcacattccacgggaaggaggagcgtgactac
cagggtcgttcatggatcgagccgcccaaggatgcgaagcctaagaacgaccactgctac
atcccaaaacgttgggttcatacatggagcggccacaccaagggtgtcgcggcaatacga
ttctttccgaagcatggccaccttctactctcggctggtatggactcgaaggtcaagata
tgggatgtgttcaattctggtaagtgcatgcggacatacatgggccactcgaaggcggtt
cgcgacatctccttttcaattgatggtaccaagttcttgagtgctgggtatgacaagaac
atcaagtattgggacactgagacggggaaggtcatctccaccttctccactgggaaggtt
ccctacgtagtgaagcttaatccagatgaagacaaacagaacattcttcttgcaggaatg
agtgacaagaagattgtacagtgggacatgaattcgggcacaatcacacaagagtatgat
caacatctaggagcagttaataccatcacttttgttgataataatcgaaggtttgttact
tctagtgatgataagtcacttcgggtatgggagtttgggattccagttgttataaagtac
atcagcgagcctcacatgcattccatgccttcaatctcgcttcatcctaattcaaattgg
ttggctgctcagagcttggataatcagatacttatatacagtacgaaggagaggtttcag
ctgaataagaagaagagatttgcaggccacattgcagcagggtatgcttgtcaggtgaat
ttttctccggatggacgttttgttatctcaggagatggagaagggaagtgttggttttgg
gactggaagagttgcaaggtctttaggacgttgaaatgtcatgaaggagtgtgcattgga
tgtgagtggcatccattggagcagagcaaggttgcaacttgcggatgggatggcatgatc
aaatattgggattaa
DBGET
integrated database retrieval system
