Musa acuminata (dessert banana): 135598584
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Entry
135598584 CDS
T03447
Name
(RefSeq) pre-mRNA cleavage factor Im 25 kDa subunit 2-like
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
135598584
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mus03019
]
135598584
Messenger RNA biogenesis [BR:
mus03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
135598584
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUDIX_2
NUDIX
Motif
Other DBs
NCBI-GeneID:
135598584
NCBI-ProteinID:
XP_064948701
LinkDB
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Position
BXJ2-1:5424020..5429310
Genome browser
AA seq
200 aa
AA seq
DB search
MVNSSVVNMYPLSNYTFGTKEAKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQEHN
HPHILLLQIGNTFCKLPGGRLKPGENEIEGLRRKLCSKLAANSPSFQPNWQIGECVAIWW
RPNFETVMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG
PVISTIPQQLSRFQFNMVSS
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggtaaactcatcggtggtgaacatgtacccactatcgaactacacgttcggcacgaag
gaggcgaagatggagaaggacacgtccgtcgctgatcgcttggcccggatgaaggtcaac
tatatgaaggaaggaatgcggacaagtgttgagggtattctactggttcaggagcacaat
catccccatatactgttactgcaaataggaaatacattttgtaagctccctggtggacgt
ttaaagcctggagagaacgagattgaaggtctgaggcgaaagctttgtagcaaacttgct
gcaaattcaccttcatttcaaccgaactggcagattggtgagtgtgttgccatttggtgg
agacccaattttgaaactgttatgtatccatattgtcctcctcatattaccaagcccaag
gagtgtaagaagcttttcctcgttcatctgtcagaaagagaatattttgctgttccaaaa
aatttgaagttgcttgctgttcccttatttgaactctatgacaatgttcagagatatggt
cctgttatctcgaccatcccacaacagttgtcgagattccagttcaacatggtctcctca
tga
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