Musa acuminata (dessert banana): 135598586
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Entry
135598586 CDS
T03447
Name
(RefSeq) splicing factor-like protein 1 isoform X1
KO
K13095
splicing factor 1
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135598586
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mus03041
]
135598586
Spliceosome [BR:
mus03041
]
Complex A
Other components
Complex A specific factors
135598586
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
RRM_1
KH_1
SF1-HH
KH_12
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
135598586
NCBI-ProteinID:
XP_064948703
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Position
BXJ2-1:5458678..5462789
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AA seq
745 aa
AA seq
DB search
MDCNLHIETDYDKETPNCEHKNHSEPEYGTQESNYEEESNGEEIAEEEDPDGEAKPCERE
VIEGLYWTEPTEEDPQEQVLDEESVGVHDQEDVSEGFRSQSSSNGDDEECELGSKPSSSD
KKRRSADESQGNMQKRQKQDDSKLEIYSYATGVIFKDKARSSNCDENIADMENTGSSGKR
KRSRSNMEPETYKVEVDIDLATKKRKTRSVNNDAKLKLLGPLKLPDFDKIPVGGTSVDPV
TEKLNSQLFEVNRMLSAHVLVDDQPKVNESDIQINSRVARLRARLIKHRQKIILELIKRN
PTFDPPDIKPPKLSKKLYIPVKEYPSYNFIGLIIGPRGNTQKRMEMETGAKISLRGKGSI
RKGRVLTYKDSRCESSEDDDLHVYIKADTQNSLDSAVQMVEKLLVPVEEEMNEHKRAQLR
ELAVLNGKLGKDSSEVQKTTPRSSTSCDICGIAFHHSVACPLIASNTGIGKSDKFFVQLG
SSGVGPFNYPPLASSISSLMSNQQFHAPASSNSKPLKEIDEAKLYVCYLPLSVNDDKLLE
LFSPFGCISEAIVIRDKTTGLSKGYGFVKYRDPSFAAEAAASMNGCRIEGKMLSVQVANQ
PSSASKTCTFPWLLNNCNNLPPYPTTAISQGKPGVMTWPGHPGSMISETRASIPKKCSFI
SHAGFIRGPPFFFGASNQNSVPPLIPDAVTSFKEPEQFPGYPNNIEFQDQSYCSRYHYRL
PSKYVHPTQTRDSYRASFAHQMPPP
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atggattgtaacttgcacattgaaactgattatgacaaagagactcctaattgtgaacac
aaaaaccatagcgagccagaatatggtactcaagagagcaactatgaagaagaatccaat
ggtgaagaaattgccgaagaagaagatcctgatggagaggctaaaccatgtgagagagaa
gttattgaaggactatattggacagagcctaccgaagaagatccacaggaacaagtgcta
gatgaggaatcagttggagtgcacgatcaggaagatgtatcagaaggattcagaagtcag
tcatcttccaatggtgacgacgaagaatgtgaattgggctctaaaccatccagttcagat
aagaaaagaagatcagctgatgaatcccaaggcaatatgcaaaagaggcagaagcaggat
gactccaagctagagatatattcttatgcgaccggcgtgatcttcaaggacaaagctagg
agctcgaattgtgatgaaaacattgcagacatggaaaatactggaagttctggtaagaga
aaacgcagtagaagcaatatggagcctgaaacttacaaggtagaagttgatatcgatctg
gctactaaaaagaggaaaaccagatcagttaataatgatgccaaattgaaattgttaggt
cctttaaagcttccagattttgacaagattcctgtaggtggcacttctgttgatccggta
acagagaaattgaactcgcagctctttgaggtaaatcggatgctgagtgctcacgtactt
gtcgatgaccaaccaaaggtaaatgagtcggatatccagataaattcaagagtggccaga
ctccgtgccagactcataaagcatcggcaaaagatcattttagagctgattaagaggaac
cccacttttgatcctcctgatatcaagcccccaaagctgtccaagaagctttatattcca
gtaaaagaatatcccagttacaattttattggccttataattggtccccgtggaaacaca
caaaagagaatggagatggaaacaggcgccaagatatcactgcgaggtaaaggttctatt
agaaaaggaagagtcctgacatataaagattccagatgcgagtcatctgaagatgatgac
ttgcatgtctacattaaggcagatactcagaattctcttgattctgcagtgcaaatggtg
gaaaaactgctggttcccgtggaagaagaaatgaacgaacacaagcgagcacagctgagg
gagcttgctgtgttgaatggaaaacttggcaaagattcaagtgaagtccagaagacaaca
ccaagatccagtacttcttgcgacatctgtggaattgcatttcatcatagcgttgcttgt
cctttgattgcatcaaacactggaatcggcaagagtgataaattctttgtacagttggga
agtagtggagttggtcccttcaactatccaccacttgctagttccatatcaagcttgatg
tccaatcaacaattccatgctccagcatcatccaacagcaaacctttaaaagagattgat
gaagctaaactatacgtgtgctatcttcccctatccgtgaatgatgacaagctactggaa
ctcttttcgcccttcggatgcatctccgaagctatagtgatcagagacaagaccacaggt
ttaagcaaaggatatggttttgttaagtacagggatccctcctttgctgctgaggctgcg
gcaagcatgaatgggtgcaggatcgagggaaagatgctctcagttcaggtcgcaaatcag
ccttcatctgcatccaagacttgcacttttccatggttgctcaacaactgcaacaaccta
ccaccttatccaactacagccatttctcaaggaaaacccggtgttatgacctggcctggt
catccaggatctatgatttccgagactcgtgcttctattcctaagaaatgcagctttatc
tcgcatgctggttttatccgtggacctccattcttttttggtgcctcaaatcaaaattcg
gtaccccctttgattccagatgctgtcacatcattcaaggagcctgagcagtttcctggt
tatccgaacaacattgaattccaggatcagtcgtactgctcgagatatcattacagactg
ccatcaaagtatgttcatccaactcagactcgtgatagctatcgagcatcgtttgctcat
caaatgcctccaccttga
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