Musa acuminata (dessert banana): 135598993
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Entry
135598993 CDS
T03447
Name
(RefSeq) WD-40 repeat-containing protein MSI3-like
KO
K10752
histone-binding protein RBBP4
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03082
ATP-dependent chromatin remodeling
mus03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
135598993
03083 Polycomb repressive complex
135598993
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mus03036
]
135598993
Chromosome and associated proteins [BR:
mus03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
135598993
Histone modification proteins
HAT complexes
HATB complex
135598993
HDAC complexes
Sin3A-HDAC complex
135598993
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
135598993
PRC2.2
135598993
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
135598993
Heterochromatin formation proteins
Other heterochromatin formation proteins
135598993
Chromatin remodeling factors
NuRD complex
135598993
NuRF complex
135598993
NuRF complex (fruit fly)
135598993
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WDR55
WD_LRWD1
EIF3I
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_HPS5
Beta-prop_RIG_1st
Beta-prop_TEP1_C
MIOS_WD40
Beta-prop_WDR19_1st
RMC1_N
Motif
Other DBs
NCBI-GeneID:
135598993
NCBI-ProteinID:
XP_064949667
LinkDB
All DBs
Position
BXJ2-1:13819221..13825880
Genome browser
AA seq
407 aa
AA seq
DB search
MERDMEEVEGGEEGAPVAAEEYPVWKKNTPFLYDLVISHALEWPSLTVQWLPSSSSSCGS
AATHRLLLGTHTSDEAPNFLMAADVLFPFPYPPPPEAPIPKVEISQTIPHRGEVNRARFM
PQRPSIVATKTCGAEVRVFDCGQRPPRPIEGTDAGPDLVLRGHATEGYGVSWSPLKEGYL
LSGSYDFKICLWDVGMSPGEKLLDAKHVFEAHTSAVEDVAWHLKNENIFGSVGDDHLLMI
WDLRSSSLKKPQHLVTAHEDEVNSLSFNPFNEWALATASSDSTIKLFDLRKLTTSLHTFS
SHTGAVLQVEWSPRHETVFASSAADKRLMIWDVCRIGDEQTVEDADDGPPELLFVHGGHT
AKISEFSWNPEMPWVIASAAEDNILQVWKMAESIYRDDYDTQDDNDH
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggagagagacatggaggaagtggagggaggagaagaaggtgcgcccgtggcggcggag
gagtacccggtgtggaagaagaacacccctttcctctacgatctcgtcatctcccacgcc
cttgagtggccctccctcaccgtccaatggctcccctcctcctcttcctcttgcggtagc
gccgccacccatcgtctcctcctcggcacccacacctccgacgaggcccccaactttctc
atggcagccgacgtcctcttcccgttcccgtacccgcctcctcccgaagccccaatccct
aaggttgaaatctcgcagaccattccccaccggggagaggtcaatcgtgcccgctttatg
ccgcagagaccctcgatcgtggccaccaagacgtgtggcgcggaagtacgcgtgttcgac
tgtgggcagcggccgccgaggccaatcgagggtacggatgctgggccggatctcgtgctg
aggggtcatgccacggaaggttatggggtgtcctggagtcccctcaaggagggctatctc
ttgagcggatcgtacgatttcaagatttgtttgtgggacgtgggaatgtctccaggggag
aagcttcttgacgcaaagcatgtgtttgaggctcatacttctgcagttgaagatgttgct
tggcacttgaagaatgaaaacatatttgggtcagttggagatgaccatcttttgatgata
tgggacctgcggtcatcatctttgaaaaagcctcaacacttggttacagctcatgaagac
gaggtcaattctctatcatttaatccatttaatgagtgggctctggcgacagcatcttca
gactcgaccatcaaactatttgatctaagaaaactgacaacaagcttgcataccttctcc
agtcacacgggagcagtgcttcaagtagaatggagcccaagacatgaaactgtttttgct
tcatctgctgctgacaaaaggctgatgatttgggacgtttgcaggattggagatgaacaa
acagttgaagatgctgatgatggaccacctgagcttctttttgtccatggaggtcacacc
gcaaagatatcagaattctcatggaaccctgagatgccatgggtcattgccagtgcggca
gaagataacattcttcaagtctggaagatggccgagagcatttatcgagatgattatgat
acacaagatgacaatgatcattaa
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