Musa acuminata (dessert banana): 135599084
Help
Entry
135599084 CDS
T03447
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC1A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
mus
Musa acuminata (dessert banana)
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mus04131
]
135599084
04121 Ubiquitin system [BR:
mus04121
]
135599084
Enzymes [BR:
mus01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135599084
Membrane trafficking [BR:
mus04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
135599084
Ubiquitin system [BR:
mus04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
135599084
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-C3HC4
zf-RING_11
zf-rbx1
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
DUF7501
Zn_ribbon_GTF2H2
zf-ANAPC11
CxC4
zf-Nse
Zf-C2H2_ZNF451_6th
Motif
Other DBs
NCBI-GeneID:
135599084
NCBI-ProteinID:
XP_064949884
LinkDB
All DBs
Position
BXJ2-1:28604376..28606804
Genome browser
AA seq
317 aa
AA seq
DB search
MSRANTHWCYVCSRAVQPLGRDMTCPNCNGGFVQELNELDDRLNPFDYFVVDSNDRRNNQ
FGIIDAFSALIRQRMGGSSREFDVHGRPSVPMGNGTRFGLEPWLLFRGQLPSHTSNGETE
LLFNGGTGVGMSRANLGHYFFGSGFEDFIEQLSRNNHHGPPPASQSAIDAMPIVKINQRH
LRGDSHCPVCKDKFELGSEAREMPCKHLYHSDCIIPWLVQHNSCPVCRHRLPSQASGHGN
HVRSRNQYFGDGSSINSYTTRENGGESQARRNLFSFLGPYGTAITTNSNTNGTGGSSSTA
VQEDINQMHYSGWPFDY
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagagcaaatacacattggtgttatgtttgcagtcgagcagttcagccactcgga
agggacatgacctgccccaactgtaatggaggctttgtgcaagaactgaatgagctagac
gacagactgaacccatttgattattttgtagtggactctaatgatcgccgcaacaatcag
tttggaattatcgatgccttctctgcattgataaggcaaagaatgggaggaagcagcagg
gagtttgatgtccatggtagacccagtgttcccatgggaaatgggacaagatttggactc
gagccttggctgctgtttcgtggccagcttccttcgcatacatctaacggagagactgaa
cttctatttaatggtggcactggagttgggatgagtcgtgctaacttggggcactacttt
tttggttctggatttgaagacttcatcgaacagcttagcaggaataaccaccatggccca
ccacctgcttcgcaatcagcaattgatgccatgcccatcgtgaagatcaaccagaggcat
cttcgaggtgattcacactgtccagtttgcaaagacaaatttgagttgggatctgaagca
cgtgaaatgccatgtaagcatttatatcactcagactgcatcatcccttggttagtccaa
cacaattcttgcccagtttgtcgccacaggctgccatcccaagcctccggtcatggaaat
catgtacgtagtagaaaccagtattttggtgatggttcaagcatcaacagttatactact
agggaaaatggtggagaaagccaagccaggagaaatctcttctcctttcttgggccatat
ggcactgcaatcaccactaactctaacacaaatgggacgggtgggagtagttctactgct
gttcaggaagatatcaatcagatgcattattctggctggcccttcgactattaa
DBGET
integrated database retrieval system
