Musa acuminata (dessert banana): 135605485
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Entry
135605485 CDS
T03447
Name
(RefSeq) protein SEH1-like isoform X1
KO
K14299
nucleoporin SEH1
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
135605485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mus03019
]
135605485
04131 Membrane trafficking [BR:
mus04131
]
135605485
Messenger RNA biogenesis [BR:
mus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
135605485
Membrane trafficking [BR:
mus04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
135605485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR3_1st
ANAPC4_WD40
Beta-prop_WDR5
Beta-prop_Aladin
Beta-prop_EML_2
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
Beta-prop_WDR3_2nd
Beta-prop_IFT122_1st
EIF3I
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
135605485
NCBI-ProteinID:
XP_064951709
LinkDB
All DBs
Position
BXJ2-2:complement(24106601..24114205)
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AA seq
336 aa
AA seq
DB search
MEREVARLGKGAICCGWNYCGLRLAVGFVDGSISIHDSLDSGSTSSASPSSSSKWKAHAS
SVLNVVWAPPECGDAIACICNDGTFSLWEETGEGSKSTDTEHPTWKLCKLFESSGSPVLD
LQFGVFSTSLKMVAACSDGYVKVYELLDPLEFNKWQLQAEFQNVLDSVSRFGKVSCSSAS
IAWNPQRGEGQQCSFVLGFSSDLPQFNSSKIWEFDEAHQRWIPVAELALPGDDSDMVHAV
AWAPNIGRPFEVIAVATCKGIAIWHVLLDPESNGRPTTEKVALLPGHDGEVWQLEWDMGG
MTLASTGSDGMVRLWQSNINGIWHEHASLDCSGAQS
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggagcgggaggtggcgagattggggaagggtgccatctgctgcggttggaactactgc
ggcctgaggctggccgttggcttcgtcgacggctccatctccattcatgactccctcgat
tcaggctctacctcttctgcctctccttcctcctcctccaaatggaaggcgcatgcgagc
agcgttctgaacgtagtttgggctcctccagaatgtggcgatgccattgcctgcatctgc
aatgatggaaccttttccttgtgggaggagactggcgaaggttcgaaatccactgatact
gaacatccaacatggaaactgtgtaaactctttgagagcagtggctcacctgtacttgat
ctccaatttggggtattctcgacaagtttaaagatggttgctgcctgttcagatggatat
gtgaaggtctatgagcttttggatcctttggaatttaacaagtggcaacttcaggcagag
ttccagaatgtgcttgattctgtttccagatttggaaaagtatcatgctcatctgcatcc
atcgcttggaatccccaaagaggtgaaggccaacagtgtagttttgtccttggtttcagt
tctgatctccctcagttcaattcatccaagatttgggagtttgacgaggctcatcagcgc
tggataccagttgctgagctagctttacctggagatgatagtgatatggtgcatgctgta
gcctgggctccgaacataggcaggccatttgaagttatagctgttgcaacttgcaaaggt
attgcaatatggcatgtactcttggatcctgaatccaatggaagacctacaaccgaaaag
gttgcattacttcccgggcatgatggtgaggtttggcaacttgagtgggacatgggcggt
atgactttagcatcaactggcagtgatggcatggttaggttgtggcaatccaacataaat
gggatctggcatgaacatgcatcccttgattgcagtggtgcacaatcataa
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