KEGG   Musa acuminata (dessert banana): 135605493
Entry
135605493         CDS       T03447                                 
Name
(RefSeq) histone deacetylase 6-like
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
mus  Musa acuminata (dessert banana)
Pathway
mus03082  ATP-dependent chromatin remodeling
mus03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:mus00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    135605493
   03083 Polycomb repressive complex
    135605493
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mus03036]
    135605493
Enzymes [BR:mus01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     135605493
Chromosome and associated proteins [BR:mus03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     135605493
   HDAC complexes
    Sin3A-HDAC complex
     135605493
    BRAF-HDAC complex
     135605493
    REST complex
     135605493
    SHIP complex
     135605493
    MiDAC complex
     135605493
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     135605493
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    135605493
  Chromatin remodeling factors
   NuRD complex
    135605493
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 135605493
NCBI-ProteinID: XP_064951724
LinkDB
Position
BXJ2-2:complement(24377696..24384605)
AA seq 468 aa
MTIASSSGGAAAGGGGGEGASLASASCVDGGRRRVSYFYEPTIGDYYYGQGHPMKPHRIR
MAHNLVVHYALHRLMEVSRPFPASAADIRRFHSDDYVDFLASVSPATAALASAQAQPLSD
PASASASSRQLKRFNVGEDCPVFDGLFEFCQASAGGSIGAAVKINRGDADIAINWAGGLH
HAKKCEASGFCYVNDIVLGILELLKYHRRVLYVDIDIHHGDGVEEAFFTTDRVMTVSFHK
YGDFFPGTGHIKDVGFGQGKYYALNVPLNDGMDDESFRGLFRPIIQKVMAVYQPDAVVLQ
CGADSLAGDRLGCFNLSVKGHADCLRYLRSFNVPMLVLGGGGYTMRNVARCWCYETAVAI
GVEPDNQLPYNEYYEYFGPDYDLHIRPRSMENKNSSKELEDIRNMLMDYLSKIEHAPSVQ
FQSRPPDTEAPEEEDEDMEHRMQPKLWSGEYYDSDSEECPKPDPESVP
NT seq 1407 nt   +upstreamnt  +downstreamnt
atgacgatagcgtcgtcatcggggggggcggctgctggcggcggcggcggggagggggcg
tcgctggcgtcggcgtcgtgcgtggacgggggaaggcggcgggtgagctacttctacgag
ccgaccatcggggactactactacgggcaggggcacccgatgaagccccaccgtatccgc
atggcccacaaccttgtcgtccactacgccctccaccgcctcatggaggtctcccgccct
ttccccgcctccgccgccgacatccgccgcttccattccgacgactacgtcgacttcctc
gcctccgtgtcccccgccaccgccgccctcgcctccgcccaggcccagcccttgtccgac
cccgcctctgcctccgcctcctcccgccaactcaagcgcttcaacgtcggagaggactgc
cccgtcttcgatggcctcttcgagttctgtcaggcctccgccggcggctccatcggggcc
gccgtcaagatcaaccgcggcgacgccgacatcgccatcaattgggccggcggcctccac
catgccaagaagtgcgaggcttctggcttctgctacgtcaacgacatcgtcctcggcatc
ctcgagctcctcaagtaccacaggcgtgttctctatgtggacattgatatccatcatgga
gatggtgttgaagaggcatttttcacgactgacagagtcatgactgtgtccttccacaaa
tatggggacttctttcctggaactggccatataaaggacgtcggatttgggcaaggaaag
tactatgctctaaatgttcctctaaatgatgggatggatgatgagagttttcggggtctt
tttaggcctatcatccaaaaggtgatggcagtttatcagcctgatgcagttgttctccag
tgtggtgctgattctttggcgggagacagactaggttgctttaacttgtctgtgaagggg
catgcagattgtctacgataccttagatccttcaatgtaccaatgttggttctgggaggt
ggaggctatacaatgcgcaatgttgctcgctgctggtgctatgagacagcagttgcaatt
ggagtggaacctgacaatcagttgccttacaatgaatactacgagtattttggtcctgac
tatgatcttcatattcgaccaagaagcatggagaataaaaattcatcaaaggaactggag
gacattaggaatatgttaatggattacctttcgaaaattgaacatgctcctagtgtgcag
ttccagtcaagaccacctgatacagaagctcctgaggaggaagatgaggatatggagcac
aggatgcaaccaaaactatggagtggcgagtattatgattctgactctgaggagtgcccg
aagcctgatcctgaaagtgtaccatga

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