Musa acuminata (dessert banana): 135605668
Help
Entry
135605668 CDS
T03447
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 8-like
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135605668
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mus03019
]
135605668
03036 Chromosome and associated proteins [BR:
mus03036
]
135605668
Enzymes [BR:
mus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
135605668
Messenger RNA biogenesis [BR:
mus03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
135605668
mRNA degradation factors
5'-3' decay
Decapping complex
135605668
Chromosome and associated proteins [BR:
mus03036
]
Eukaryotic type
Gene silencing
piRNA pathway
135605668
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
CMS1
NA-iREase2
TFIIA
Motif
Other DBs
NCBI-GeneID:
135605668
NCBI-ProteinID:
XP_064952099
LinkDB
All DBs
Position
BXJ2-2:complement(26662291..26670135)
Genome browser
AA seq
486 aa
AA seq
DB search
MNPRSRYPPPGMGNGRGGGASTNPNFYARSAHQHQQYAQQSPAHGQPSQQFQQQQQWSRR
NQLGGDFGAGQIVKSVQSEATNTSLQDWKAQLKMAPPDTRYKTEDVTATKGNEFEDYFLK
RELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDHNV
IQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGR
ILDLARKGVCVLKDCSMLIMDEADKLLSPEFQPSIEHLIQFLPANRQILMFSATFPVTIK
HFKDRYLPKPYIINLMDELTLKGITQFYAFVEERQKVQCLNTLFSKLQINQSIIFCNSVN
RVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNV
VINFDFPKNSETYLHRVGRSGRYGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPQID
QAIYCR
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctcgaagtaggtatcctccgcccggcatgggcaacggccgagggggcggtgcg
agtacgaaccctaatttctatgcaaggagcgctcaccagcaccagcagtatgctcagcag
agtccggcgcatggtcagccaagccagcagttccagcagcaacagcagtggtcgagacgg
aatcagcttggaggtgactttggtgctggccaaatagtgaaatcggttcaatctgaggcc
actaatacgagtttgcaagattggaaggcacaattgaaaatggcacctccagacacacgc
tacaagacagaggatgtgactgcaaccaaggggaatgaattcgaggactattttctgaag
cgagaactgcttatgggaatatatgagaaaggtttcgaaaggccttcaccaattcaggaa
gaaagcattccaattgcactcactggcagtgacattcttgccagagctaaaaatgggact
ggaaagactgctgcattttgtattcctgcacttgagaaaattgaccaggatcataatgtc
attcaagttgtcatattggttcctacaagagagttagctcttcagacatcacaagtttgt
aaggaacttgggaaacatttgaatattcaagtcatggttactactggaggaaccagcttg
aaggatgacattatgcgtttatatcaacctgttcacttgcttgttggaacacctggtcga
attcttgatcttgcacgaaaaggtgtctgtgttttgaaggattgttcaatgcttattatg
gatgaggcggataaacttctctctcctgagttccagccgtctatagagcatcttattcag
tttcttcctgccaataggcagattttaatgttttccgcaacattccctgttaccataaaa
cattttaaagacagatatcttccaaaaccatatattatcaatctaatggatgaactgaca
ctgaagggaataacacaattctatgcttttgtagaggaaaggcagaaggttcaatgcctt
aatacccttttctcaaagctgcaaattaaccaatctattatcttttgcaattctgttaac
cgggtggagctattagcaaagaagatcactgagcttggttattcatgcttttacattcat
gctaagatgttgcaagatcacaggaaccgcgtctttcatgactttcgcaatggtgcatgc
aggaatcttgtctgtacagatctgtttacaaggggaatcgatattcaagctgttaatgtt
gtgatcaattttgattttccaaagaactctgagacgtatctgcacagggttggtcgttca
ggcagatatggtcaccttggtctagcagtcaatcttatcacctatgaggatcgctttaac
ttgtataggattgagcaagaactcggaacagaaataaagcagattcctccgcagattgat
caggctatatactgcaggtga
DBGET
integrated database retrieval system
