Musa acuminata (dessert banana): 135605780
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Entry
135605780 CDS
T03447
Name
(RefSeq) squalene synthase 1-like
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus00100
Steroid biosynthesis
mus00909
Sesquiterpenoid and triterpenoid biosynthesis
mus01100
Metabolic pathways
mus01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
135605780
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
135605780
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
mus01006
]
135605780
Enzymes [BR:
mus01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
135605780
Prenyltransferases [BR:
mus01006
]
Terpene biosynthesis
Squalene/phytoene synthase
135605780
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Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
135605780
NCBI-ProteinID:
XP_064952314
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Position
BXJ2-2:complement(27855959..27869868)
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AA seq
408 aa
AA seq
DB search
MGMLAAMVTHPDEVYPMVKLKLASDRIRRQIPAEPHWSFSYSMLQKVSRSFALVIQQLEP
QLRDAVCVFYLVLRALDTVEDDTSIPSDIKVPILQNFYLHIYDRKWHFSCGAKDYKILMD
KFHLVSTAFLELDKSYQEAIEDITRRMGAGMAKFICKEVESIDDYDEYCHYVAGLVGLGL
SKLFHASGSEELASDNLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYADKL
EGFKNAENSTKAVECLNDLVTNALIHAEDCLQYMSALKDLAIFRFCAIPQIMAIGTLALC
YNNVEVFRGVVKMRRGLTAKIIDQTNSMSDVYGAFYEFSSLLKSKIDDNDPNAKLTRKHV
EAIQKACGSSGLLDTRGLRMHESNRHTSLLIMVVFLLLALLLSFLSHK
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggggatgctggcagcgatggtgacgcatcccgacgaggtgtacccgatggtgaagctg
aagctggcgtccgaccggatccgtcgccagatcccggcggagccccactggtccttctcc
tactccatgctccagaaggtctcccgcagcttcgctctcgtcatccagcagctggaaccc
cagctacgcgacgccgtttgtgttttctatctggtgctcagagccctcgatactgttgaa
gatgatacgagcataccttctgacatcaaagtgccaattctgcagaacttttatctccac
atctatgatcgcaaatggcatttttcatgtggtgcaaaggactacaaaattcttatggat
aaatttcatcttgtctcaactgctttcttggaacttgataaaagttatcaagaggcaatt
gaagatattaccaggagaatgggtgcaggaatggcaaagttcatatgcaaggaggtggaa
tcaatagatgattatgatgaatattgtcactatgtggcaggactggttgggctaggactt
tctaagctctttcatgcttctgggtcagaagaactggcttcagataatctgtccaattcg
atgggtttgtttcttcaaaaaacaaacatcattcgggattatttggaggacataaatgag
attccaaagtcacgcatgttttggcctcgccaaatctggagcaaatatgctgacaagctt
gagggtttcaagaacgctgagaactcaacaaaggcagtagaatgcttgaatgaccttgta
actaacgctttgatccatgccgaagattgcctacagtacatgtccgcactaaaagatctt
gctatctttcgtttttgtgccattccacagataatggcaattggaaccctagccttgtgc
tataataatgtggaggtgtttagaggtgttgtaaaaatgcgacgtggactaacagctaag
attatcgaccagacaaactcaatgtcagatgtatatggtgctttttatgaattttcttct
ctgctgaaatcaaagattgatgataatgatccaaatgccaagctcactcgtaagcatgta
gaggctatacagaaggcttgtggatcttctgggttgcttgatacaaggggacttcgtatg
cacgagagcaatcgtcacacttcattgctgattatggtggtcttccttttactagccctg
ttactttcctttctatcacacaaatga
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