Musa acuminata (dessert banana): 135606718
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Entry
135606718 CDS
T03447
Name
(RefSeq) formamidopyrimidine-DNA glycosylase-like isoform X1
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
135606718
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mus03400
]
135606718
Enzymes [BR:
mus01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
135606718
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
135606718
DNA repair and recombination proteins [BR:
mus03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
135606718
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
Fpg-like_C
Ribosomal_S13
Motif
Other DBs
NCBI-GeneID:
135606718
NCBI-ProteinID:
XP_064953923
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All DBs
Position
BXJ2-3:complement(657532..663910)
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AA seq
367 aa
AA seq
DB search
MPELPEVEAARRAIEEHCTGKKIAACSVADDLKVIEGVSRSDLEAALFGKTILAALRKGK
NLWLRLDSPPFPTFQFGMAGAVYIKGVAVTKYKRSAVSDTDEWPSKHSKVFIELDDGLEF
SFTDKRRFARVRLLEDPESVPPISELGPDALLELMPVGDFVESLSKKKTAIKALLLDQSY
ISGIGNWIADEVLYQAKIHPLQIASSLSKECCESLHRCIREVIEYAVEVDADSNRFPKEW
LFHFRWGKRPGKVNGMKIEFITAAGRTSAYVPELQNLTGNQSEKVSRKKSTNVMSKKNVD
AEESPSEKEETYETSKKNETAEDNKGREKKTSETENDRISSKGMAKKHVAVAKSSLRKRS
KSSQADL
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgccggaactcccggaggtggaggcggcgcggcgggcgatcgaggagcactgcaccggg
aaaaagatcgccgcctgttcagtcgcagacgacctcaaggtcatcgagggcgtctcccgc
tccgacctcgaggcggccctcttcggcaagaccatcctcgccgccctccgcaagggcaag
aatctctggctccgccttgattctccgcccttccccaccttccagttcggaatggcgggt
gccgtttacatcaagggcgtcgcagtaacgaagtacaagaggtctgcggtgagcgatacc
gatgaatggccttcaaagcactcgaaggtgttcattgaactagatgatgggctggagttt
tcttttactgataagagacgttttgcccgagttcggttgcttgaagatccagaatctgta
cctccaatttctgagctagggccagatgctctattagagcttatgccagttggtgacttt
gtggagtcacttagcaaaaagaagactgcaataaaggctcttttactggatcagagctat
atttcaggtattggtaactggatcgctgatgaggtgctttaccaggccaagattcatcct
cttcaaattgcttcaagcttgtcaaaagagtgctgtgagtcactgcacagatgcatcaga
gaggttattgaatatgctgttgaagttgatgctgactccaatcgtttcccgaaagaatgg
ttgtttcattttcgatgggggaaaaggcctggcaaggtcaatggaatgaagatcgaattt
atcacagctgctggcagaacttcagcctatgtgccagaattacagaatttaactggaaac
cagtcggaaaaggtttcaagaaagaaatcaacaaatgtcatgtccaaaaaaaatgtggat
gcagaagaatcaccaagcgagaaagaggaaacttatgaaacttcgaagaaaaatgagacc
gctgaggataacaaaggacgggaaaagaaaaccagtgagactgagaatgacagaatttca
agtaaaggaatggcaaagaaacatgttgcagtagcaaaaagctcattgcggaaaagatca
aaatctagtcaagccgacttataa
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