Musa acuminata (dessert banana): 135606796
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Entry
135606796 CDS
T03447
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
135606796
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mus03019
]
135606796
Messenger RNA biogenesis [BR:
mus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
135606796
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
135606796
NCBI-ProteinID:
XP_064954118
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Position
BXJ2-3:1519975..1527759
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AA seq
477 aa
AA seq
DB search
MRSDLGKLFVGGISWDTNEERLREYFRNYGEVVEAVIMKDRTTGRARGFGFVVFSDPTVA
EQVVMEKHVIDGRMVEAKKAVPKDDQQILYRNNSNVHASPGNGRTKKIFVGGLPSTITEG
DFKKYFDQFGTVTDVVVMYDHNTRRPRGFGFITYDSEDAVDKVLFKSFHELNGKMVEVKR
AVPRELSPGPNMRSPIGGYNSGLNRVNSFLNGYTQGYNPSLIGGYGMRTDSRLGLSSSAR
NGFSSFGPGFGMKMNFEPSMIPNLGGNSSFSNNIGYGGGLSPYYTGNSTRYTSPNGYGGS
STNTSSDFSSMVRNAWGGRGLSYTMNNASYNDYMAFGNGSLGGFANRTSNWGSAPPISAR
AGESTSSYVSGNLSYGDDDSDFDLGAGNFGREGGTISAKTSFAASTGEFEGNYAELYGGS
SVYGDPTWRSSSSELEGTGPFEYGLGNMPSDIIGKGSADYAGNYNVTNRQPNRGIAT
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgcggtcggatcttggaaagctgttcgtcggtgggatttcctgggacaccaacgaggag
cgcctgcgggagtacttcaggaactacggagaggtggtggaggccgtgatcatgaaggac
cggaccactggccgcgctcgcggtttcggattcgttgtgttctcagacccgaccgtcgcc
gagcaggttgtcatggaaaagcatgtgatcgatggacggatggttgaggcgaagaaagct
gttcccaaggacgaccaacagatcctctatagaaacaacagcaacgtgcatgcttctcct
ggtaacggccgcactaagaagatttttgtgggaggcctgccatccaccattacagagggt
gacttcaagaagtactttgatcagtttgggacagtcactgatgttgtggtgatgtatgat
cacaacacccgtaggcccaggggatttggtttcatcacctacgactcagaggatgctgtg
gataaggtgctatttaaaagcttccatgagctgaatggcaagatggtagaggtcaagaga
gctgttcccagagaactctccccagggcctaacatgcgctcccctattggcggatataac
tccggtctgaatagagtgaacagctttctgaatggatatactcagggatacaatccaagc
ttgattggtggctacggaatgaggacggatagtcgattaggactttctagtagtgcaagg
aatggtttctcttcatttggtcctggctttggaatgaagatgaattttgaacctagtatg
ataccaaaccttggagggaattcaagttttagcaacaatattggatatgggggtggttta
agcccatattacactgggaactccactagatacactagtcctaatggttatggtgggagt
agtacaaatactagctctgatttcagctcaatggttcggaatgcttggggtggtagaggt
cttagctatactatgaataatgcaagttacaatgactatatggcctttgggaatggtagc
cttggcggctttgccaataggacttcgaactggggaagtgctcctcctatctcagctcgg
gctggggaaagcacttccagttatgttagtgggaatctcagttatggagatgatgatagt
gatttcgatcttggtgctggcaattttgggagagaaggtggtactatatctgctaaaact
tcctttgctgcatcaactggtgaatttgaaggaaattatgcggagctgtacggtggcagt
tcagtttatggtgatcctacttggcgatcatcatcttcagaacttgagggtactggtcca
tttgaatatgggcttggtaatatgccttcagatatcataggcaagggctctgctgattat
gcgggcaattataatgttaccaatagacaaccaaatagaggaattgctacctaa
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