Musa acuminata (dessert banana): 135607344
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Entry
135607344 CDS
T03447
Name
(RefSeq) probable E3 ubiquitin ligase SUD1
KO
K10661
E3 ubiquitin-protein ligase MARCH6 [EC:
2.3.2.27
]
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
135607344
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mus04121
]
135607344
Enzymes [BR:
mus01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135607344
Ubiquitin system [BR:
mus04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
March proteins
135607344
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MARCHF6_C
RINGv
zf-RING_2
zf-ANAPC11
DUF3182
Motif
Other DBs
NCBI-GeneID:
135607344
NCBI-ProteinID:
XP_064955173
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Position
BXJ2-3:complement(10250136..10261542)
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AA seq
1115 aa
AA seq
DB search
MEEIADRSFPSSSSSVDGLLLPPPPPPPLPPSLATGASSVARYDGDDDDDEEGDVCRICR
NPGDAENPLRYPCACSGSIKFVHQDCLLQWLSHSNARQCEVCKHTFSFSPVYADNAPSRL
PFQEFVVGMAMKACHVLQFFLRLAFVLSVWLLMIPFITFWIWRLSFVRSLGEAQRLFLSH
ISVPVILTDCLHGFLLSAGIVFIFLGATSLRDYFRHLRELGGHDAERDDEGQERNGARAV
RRLPGPVNRIPVGDGNAEDGGGAQGIAGAGQMIRRNAENVAARLEMQAARLEAHVEQMFD
GLDDADGAEDVPFDELVGMQGPVFHLVENAITVLASNAIFLGVVVFLPFSLGRVVLYYVK
WFFSSVSSPLMGKVMPLSLSVLSMANSTLKNTLTAAKLSTESNNEGLLGHMMEVVTGSQK
MNATELDDISNSVGRSISADLFKGTVIGSSHLSDVTTLAVGYMFIFCFVIFYLGLLALIR
YSRGERVIFGRLYSILTIAEAIPSLLRQSLAGMRHLMTMIKVAFLLVIELGVFPLMCGWW
LDVCTLRMLGTTIAQRVEFFSASPLTSSSIHWLVGIVYMLQISIFVSLLRGVLRNGVLYF
LRDPADPNYNPFRDLIDDPVHKHARRVLLSVAVYGSLIVMLVFLPVKLSMRLAPTMFPFD
ITIFDPFTEIPTDVLLFQICIPFAIEHFKLRTTIKSLLRHWFTAVGWALGLTDYLLPPPE
EIGTQDAGNIELIRRDRLQNVRQGGAGRNDQPLIPRIVGEDHQGRRVIVGDADAAEESDV
DDQADSEYGFVLRIVLLLVLAWMTLLIFNSAMIILPVYLGRSLFNAIPRLPITHGFKCND
IFAFSIGCYIIWTIVAGTRYSIDYIRTHRVPVLLLQIWKWCAIVLKSSALLSIWIFIIPV
LIGLLFELLVIVPLRVPVDESPVFLLYQDWALGLIFLKIWTRLVILDQMAPLVDENWRRK
FERVREDGFSRLRGLWVLREIMIPIISKLLTALCIPYVFAKGVFPVFGYPLIVNSAVYRF
AWLGCLVFSLVCFCAKRFNAWFTNLHNSIRDDRYLVGRRLHNYGEKITSESESGPHVQEL
NSADPGLIHREQDADIGLRFRRGNQFPNQRGRQML
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atggaggagatcgctgatcgcagcttcccttcctcctcctcgtccgtcgacgggcttctg
cttccacctccaccacctcctcctctacctccttccctggcgacgggcgcctcctccgtg
gccaggtacgacggcgacgacgacgatgacgaggagggggacgtgtgccggatctgccgc
aaccccggggacgccgagaacccgcttcgttacccctgcgcctgcagcggcagcatcaaa
ttcgtccaccaggactgcctcctccagtggctcagccacagcaacgctcgccagtgcgag
gtctgtaaacatactttttccttctcccctgtttatgctgacaatgctccttcaagactt
ccctttcaagaatttgtggttggaatggcaatgaaagcatgccatgttttgcaattcttc
cttcgacttgcttttgttctttctgtttggctccttatgatacctttcattacattttgg
atttggcgcctttcctttgtaaggagtctcggtgaagctcagaggctgtttttgagtcac
atatctgtacccgtaatactcaccgattgcttgcatggttttctactttcggccggcatt
gtgtttatatttcttggagctacctctttaagagattattttagacacttacgagaactt
ggaggacatgatgctgagagggatgatgaaggtcaggaaaggaatggtgctcgtgctgtc
aggaggcttcctggccctgttaataggatccctgttggtgatgggaatgctgaagatgga
ggcggagctcaaggaattgctggggctggtcaaatgattagacggaatgcagaaaatgtt
gctgctcggctggaaatgcaggctgctcgtcttgaagcccatgttgaacagatgtttgat
ggtttagatgatgctgatggtgctgaagatgtgccatttgatgagcttgttggaatgcaa
gggcctgtattccatttggttgaaaatgccataacggtactggcaagtaatgctatattc
ctgggtgttgtcgttttccttcctttttcgttagggagggttgtcctctactatgtcaaa
tggttcttttcatcagtttctagccctctgatggggaaagtaatgccactctcattatca
gtactgtctatggcaaacagcacattgaagaatacattgactgctgcaaagttgtcgact
gaaagcaataatgaaggcctcttggggcacatgatggaggtggtcactggatcacagaaa
atgaatgccaccgagctagatgatatatccaacagtgttggcaggtccatttcagctgat
cttttcaagggaacagtgattggctcctcacatctatccgacgtgactactcttgcagtt
ggctacatgtttatattttgctttgttatcttttatcttgggcttcttgctttgattcga
tacagtagaggtgaacgggtgatatttggaaggctttatagtatacttacaattgcagaa
gcaattccttctcttcttaggcagtccctggcaggcatgagacatttgatgaccatgatc
aaggttgcatttcttttggttatcgaacttggtgtcttcccattgatgtgtgggtggtgg
cttgatgtatgcactttgaggatgctgggaacaacaattgctcaaagagtagaattcttt
tcagcctcacccttaactagctcctcaattcactggcttgttggtattgtttacatgctt
caaatcagcatttttgtgagtcttcttagaggggtgttgcgtaatggagttctatatttt
ctgcgtgatccagcggatccaaactataatccatttcgtgaccttattgatgacccagtg
cataaacatgcacgacgtgttttgctgtctgttgctgtttatggcagtttgatagtgatg
cttgtatttttacccgtcaaactttctatgcgccttgcacctaccatgttcccctttgac
atcaccatcttcgacccattcactgaaattcctactgatgtactactgttccaaatttgc
ataccatttgctattgaacatttcaagctacggacaacgatcaaatctcttctacggcat
tggtttacggcagttggttgggcgcttggtttgactgattacttgctaccaccaccagag
gaaattggcactcaagatgctggcaacatagaactgataagacgggacagattacaaaat
gttcgtcaaggtggagctggtcggaatgatcagcctttgataccgagaatcgttggtgaa
gatcatcagggtagacgggtgattgttggagatgctgatgctgctgaagaatctgatgta
gatgatcaggcagattctgagtatggttttgttcttcgtattgttttattgctggtcttg
gcatggatgactcttctgattttcaactctgcgatgatcatccttcctgtttaccttggg
cgttcactttttaatgccattcctaggcttccaattactcatggtttcaagtgcaatgat
atctttgctttcagtattgggtgttacatcatctggaccattgtagctggaacaaggtat
tctattgattatatcagaacccatagggtacctgttttgctattgcagatatggaagtgg
tgtgcaattgtattgaagagctctgccctattgtcaatatggatatttatcatcccagtg
cttattggcctcttgtttgagcttttagtgattgtgccactgagggtgcctgtggatgaa
agcccagtttttctcttgtaccaggactgggctttaggtcttatattcctgaagatctgg
actcgcttggtaattttagatcagatggcaccactagtggatgagaactggcggaggaag
tttgaaagagtaagagaggatgggttctcacggctgaggggcctgtgggtgctgcgcgag
atcatgatcccgatcatctcaaagctgctgactgcactttgcattccctatgtgtttgcg
aaaggcgtcttccctgtctttggctatccactgatagttaattctgcagtttaccggttt
gcttggctgggatgcctcgtcttcagcttggtgtgcttctgtgctaagaggttcaatgct
tggttcaccaacctccacaattccattagggatgaccgatatctcgtcggcagaaggttg
cataactatggggagaagatcacaagtgaatcagagagtgggcctcatgtccaagaactg
aactctgctgatcctggtttaattcatcgtgagcaagatgctgatatagggttgaggttt
agacgtggtaatcagttccctaaccaacgaggcaggcagatgctttaa
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