Musa acuminata (dessert banana): 135607401
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Entry
135607401 CDS
T03447
Name
(RefSeq) protein transport protein SEC16A homolog
KO
K20353
COPII coat assembly protein SEC16
Organism
mus
Musa acuminata (dessert banana)
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mus04131
]
135607401
Membrane trafficking [BR:
mus04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
135607401
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
OCRE
Motif
Other DBs
NCBI-GeneID:
135607401
NCBI-ProteinID:
XP_064955262
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All DBs
Position
BXJ2-3:complement(11363816..11374303)
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AA seq
1401 aa
AA seq
DB search
MGSPSPLQVEDQTDEDFFDKLVDDDFGVEGSTPHSEKIARDLSNLSLDDVGTSLEDPDNA
GLISESNGQQQSGSLESSEFSDRGVLVSKHSMPSISSVDQVVPLESSSMRTVGIEPQGLS
TGKNDGSKGTSVKEVQWSAFSVGSQQFDNAGLETSSDFFAQNADSLADKLKSDADLNFVP
LENQNANIEPYTDSSNDQGVQLVGSATEQNWDGVDAQYWESLYPGWKYDATTGQWYQLGG
YDATTNTQLNSYETAIVNSQGDFMDSAQDADLDSNLGSSDVLFLQQTSPSVLETIAEEST
LNTTSSWNLGYQGSMDYPPNMIFDPQYPGWYYDTNTQQWYTVESYTQTKEMVPTVAQNEV
GALADYSKGNYHICDDVGQSEQSTDGVLAGQVSGECWNHTTNSYAQKNMLQAEQMDESRQ
SGVLSGNQQIGSFYSSTIPGGSYTDQNVGFRTFQPVVSHNFGSNNDTIRPQNSIQGESMY
QMNHQKMAPNAHDNLSSSYTGNQIQNSVDYSQHLYQDTNASYTQFSYVSHEGRSSAGRPV
HALVSFGFGGKLIVMKNSSTSGTILDYGSQGTVDGAISILSLSEVVMNKVDASSTVSGSV
LDYFRSLCRQSFPGPLVGGSAATKEINKWIDERILSYESPVMEFQKGKLLKLLLSLLKIS
LQHYGKLRSPFGSDPSLEDVNGPEMAVTKLFASSKEINAPLGEYGWYTHCLNNIPSEGQL
QAIAAKVQSLLVSGRRKEALQCAQEGQLWGPALVLAAQLGDKFYVDTVKKMARHQFRFGS
PLRTLCLLIAGQPADIFSMDNIASSKQPAEIHASGMLDEWEENLAIITANRTKDDELVMT
HLGDCLWKEREEIIAAHTCYLIAEANIEPYSDSARLCLIGADHWKYPRTYATPDSIQRTE
LYEYSKVLGNSQFILLPFQPYKLIYAHMLAEVGKISDSLKYCQASSKLLKNSGRTSEVEM
WRSMLSSLEERLRAHQQGGYGTSLAPANLVGKLFTSFDRSIHRMIGAPPAPLPPMPQRSV
TDKETHTIFPRVANSQSTMAMSSLVPSTSGETISEWTGDNSRKSRHNRSVSEPDFGRSPK
QDSSSDGAQSKATVSGGSRFGRIGSQLLQKTMGWVSRSHRQAKLGESNKFYYDEKLKRWV
EEGADPPAEEPAIPPPPTTIPFQNGMPDYNASNAFKSENNIKDAFQRESHTDKLGPVTTP
SVPLEHNSGIPPIPPSQNQFSARGRMGVRSRYVDTFNKGGGSLTNTFQSPAVPSVKPLVG
AKFFVPNTPATVDERETDAAGKNNQDVSTGEEPPKSVIRGASFSSPSPSSSSMQRFPSMD
HIAAPVGNKGSAAASWTGNGPLSRTRAASWSGGYPESVNQKMTGMNPMGSTTTTQAGAFS
SSSLQRNGSSLGDDDLHEVEL
NT seq
4206 nt
NT seq
+upstream
nt +downstream
nt
atgggatctccgtctcctctccaggtggaagaccaaaccgatgaggatttctttgataag
ctcgtggatgatgattttggagtggagggatccactcctcattccgaaaaaattgctaga
gatttatctaacctcagccttgatgatgttggtacctcactggaggatcccgacaatgct
ggattgatttctgaatcaaatggtcagcagcaaagtgggtcattagagtcgtctgagttt
tcagataggggtgttttggtctcaaagcacagcatgccttctatatcttctgtggatcag
gtagtcccattagaaagttcatctatgcgcactgttgggattgaaccacaaggtttgtca
actggtaagaacgatggatcaaagggaacaagtgtaaaggaggtccagtggagtgcattc
agtgttggctcacagcagtttgacaatgctgggttggaaacctcttctgatttctttgct
cagaatgctgattcattggctgataaactgaaatctgatgctgaccttaattttgttcct
ctagaaaaccaaaatgcaaatatcgaaccatatacagattcctcaaatgaccagggtgtg
caacttgttggttcagccactgagcagaattgggatggagttgatgcacaatactgggaa
agtctctaccctggttggaagtatgatgcaaccactgggcagtggtatcaactgggtggt
tatgatgcaaccacaaatacacagttaaatagctatgaaacggctattgtgaattcacag
ggggatttcatggacagtgctcaagatgctgatttggattccaatttggggagttcagat
gtgttatttttgcagcagacttcaccatcagtcttggagaccatagcagaggaaagtaca
ttaaatactacttctagttggaatcttggttatcagggtagcatggattacccacctaat
atgatatttgatcctcaatatccaggatggtactatgacacaaacacccaacagtggtac
actgttgagtcatacactcagactaaagagatggtgccaactgtagctcagaatgaggtg
ggtgctttggctgactactccaaagggaactaccacatatgtgatgatgttggccaatct
gaacaaagcactgatggtgtcctagccggccaagtgtctggagagtgttggaatcataca
acaaatagctatgctcagaagaacatgctccaggctgaacaaatggacgaaagtaggcag
tctggagttttatctggaaaccagcagatagggagcttttacagttcaaccatccccggt
ggaagttatacagatcaaaatgtaggtttcaggacatttcaacctgttgtgagtcataat
tttgggagcaataatgacaccattaggcctcagaactctatccagggggaaagcatgtat
cagatgaatcatcaaaagatggccccaaatgcacacgataatttatccagcagctacaca
ggcaatcagattcagaactcagttgactactctcagcatttgtatcaagatacaaatgct
tcttatactcagttctcttacgtttctcatgaaggaagatcatcagctgggcgtcctgta
catgctttggttagttttggatttggtggaaaactcatagtcatgaaaaattccagcact
tctggaacaattttggactatggaagccagggaactgttgatggtgcaatctcaatcctt
agcttatcggaagttgtgatgaacaaagttgatgcatctagcactgtttctggcagtgtc
ttggattacttccgttccctgtgtcgtcaaagttttcctggtccacttgttggtgggagt
gctgctacaaaggaaataaacaaatggatagatgagagaatcttgagctacgagtctcct
gtcatggagtttcagaaaggaaaacttttgaagctgcttctttcattgctcaaaatatca
ttgcaacattatggaaaactccgatctccttttggatctgacccatcattagaggatgta
aatggcccagaaatggcagtaactaagctgttcgcttcatctaaagagatcaatgctcct
ttaggagaatatggttggtatactcattgtttgaataatattccatcagaaggacaacta
caggctattgctgccaaggtacaaagccttcttgtttctggtagaaggaaagaggctctc
caatgtgcacaggaaggtcagttgtggggtcctgcacttgttcttgctgcacagctcggc
gacaagttttatgttgacacggtgaagaagatggcacgccatcagtttagatttggatca
cctttacgaacactgtgcctacttattgctgggcaacctgcagatatattctctatggac
aacatagcttcatctaaacagcctgcagagatccacgccagtgggatgttggatgagtgg
gaagagaatttggccattataactgcaaacagaacaaaggatgatgaacttgtaatgact
catcttggagattgcctatggaaagagagagaagagataattgctgcacacacatgctac
ttgattgctgaagccaatattgagccatattctgacagtgcaagactctgtcttattggt
gcggaccactggaaatatcccagaacatatgccacacctgattctattcagcgaacagag
ctatatgaatattcaaaggtgcttggaaattctcagttcatcctactgcctttccagcca
tacaagctaatttatgcccacatgctggctgaagtggggaagatctcagattcgctgaag
tactgtcaagcatcttcaaagttgctgaagaactctggtcgtacttctgaggttgaaatg
tggagatcaatgttatcatcccttgaggagagactgcgtgcccaccagcagggtggctat
ggtacaagcttggctcctgcaaatctagttggaaaattgttcacctcctttgacagatcc
attcatcgcatgattggtgcaccaccagcacctctgccgccgatgcctcagaggagtgtt
actgataaagaaacccacactattttcccaagagtggcaaatagtcaatctacaatggcc
atgtcctctttagttccatcaacatcaggagaaaccatttctgagtggactggtgataat
agtagaaagagtaggcacaacagaagcgtttcagagcctgattttggtcgaagcccaaag
caggattcaagctcagatggtgcacaaagcaaagcaacagtatctggtgggtcacgcttt
ggacgtattggctcacaacttcttcagaagaccatggggtgggtgtcaaggtcgcatcgc
caggcaaaactgggtgaaagcaacaagttctattatgatgaaaaacttaagagatgggtg
gaggaaggtgctgatcctcctgctgaggaacctgccataccaccacctccaacaacaata
ccatttcagaatggtatgcctgattacaatgcaagtaatgcttttaagagcgagaacaac
atcaaagatgctttccagcgtgaaagccacacagataagttggggccagtgacaacacct
tcagttccattggaacataattctggaattccacccattccacccagtcaaaaccagttt
tctgctcgtggtagaatgggagttcgttcaagatatgttgatacattcaacaagggcggt
ggctctttgacaaacactttccagtcacctgcagttccatctgtgaagccactggttgga
gcaaaattttttgtgcccaacacacctgcaacagtggacgaacgggaaactgatgcagca
gggaagaacaaccaagatgtctccactggtgaagaaccacctaaatcagtgatcagagga
gcatccttttcatcgccatcaccatcttcatcatccatgcaacggttcccaagcatggat
cacatagcagcccctgttggaaacaaagggtctgcagcagcatcatggactggcaatggt
cccttgtccagaacgagagcagcatcttggagtggtggttacccagaatcagtcaatcaa
aagatgactgggatgaatcccatgggcagcaccaccaccacacaagctggtgcattcagc
agctcatccctgcagcggaatggtagttccctgggggacgacgacctgcacgaggttgaa
ctctga
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