Musa acuminata (dessert banana): 135607415
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Entry
135607415 CDS
T03447
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase HRD1-like
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus04120
Ubiquitin mediated proteolysis
mus04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
135607415
04120 Ubiquitin mediated proteolysis
135607415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mus04121
]
135607415
Enzymes [BR:
mus01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135607415
Ubiquitin system [BR:
mus04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
135607415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_3
zf-ANAPC11
zf-HC5HC2H
zf-RING_16
zf-RING_5
zf-RING_11
vATP-synt_E
Motif
Other DBs
NCBI-GeneID:
135607415
NCBI-ProteinID:
XP_064955291
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All DBs
Position
BXJ2-3:12333579..12342653
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AA seq
547 aa
AA seq
DB search
MMRLETYAGFSFLATISAIYYAFSSRGQFYPALVYLSTSKICFVLLLNMCLVIMCIMWQL
VKRLFLGSLREAEVERLNEQSWREVMDILFAITIFRQDFSVTFLAMVTALLLIKALHWLA
QKRVEYIETTPSVSPLSHMRIVSFMIFLLILDCLFLYNSLRSLIQTRQASVALFFSFEYT
ILATTTVSTFVKYIFYVSDMLMEGQWERKAVYTFYLELVRDLLHLSLYIFFFLVIFLSYG
IPLHLIRELYETFRSFRMRVADYVRYRKITSNMNERFPDATQEELNATDATCIICREEMV
TAKKLLCGHLFHVHCLRSWLERQHTCPTCRALVVPPENGQVGSARHHGTPSESNQPVGSA
TEGTSSQGPSDGAGGANLSRHQARLQAAAMAASLYEKSFSYLPASSFWPSGYASNHMENP
HLEAFSGVMKQPTGEAVASGPSLQFNTHPRSIPFPASDSSIASSQTSSSNQDVQLSLLKA
HEDVIRSQIQFLQTQLQALEQQAAYQSETSSGDVVPAVADLKGKSVITSDAATSKPDGAH
QEESEKV
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgatgaggctcgaaacttatgctggatttagtttcttggctaccattagcgcgatctac
tatgcatttagcagcagagggcagttctatcctgccctggtctacctctccacctcgaag
atatgctttgtgcttcttttgaacatgtgcctggtcatcatgtgcataatgtggcagttg
gtcaagcgtttgtttcttggttctctcagagaagcagaagtcgaaaggctcaatgaacaa
tcatggagggaggtcatggatatactatttgcaatcaccatattccggcaagacttttct
gttactttcctagcgatggttacagctcttctcttgatcaaagccttgcattggttggcc
cagaagagagtcgaatatattgagacaacgccctctgtttctccgctgtcccatatgcgg
atagtttcgttcatgattttcctcttaatcctcgactgtcttttcttgtacaattctttg
aggtctctgattcaaactcggcaagcatcggtcgcactcttcttttcatttgaatacaca
atcctagcgacaacaaccgtatctacatttgtgaagtatattttctatgtaagtgacatg
cttatggaaggccaatgggagagaaaggctgtttatacattttatctcgagcttgtacgg
gaccttcttcacctgtctttatacatatttttcttcctagtcatctttctgagttatggt
attccattgcacttgatccgtgagctgtatgagacatttcgcagtttccgaatgcgtgtt
gctgattatgttcgttatcgcaaaattacatcaaatatgaatgagcgtttccctgatgca
acacaagaagaacttaatgcaactgatgcaacatgcattatatgtcgtgaggagatggtt
acagccaagaaattgctatgtggacatcttttccatgtgcattgtctaaggtcatggcta
gagcgacaacatacttgccctacttgccgagctttggttgtccctcctgaaaatgggcaa
gttggatcagctaggcatcatggaactccatcagaatctaatcaacctgttggatcagca
acggaaggcacatcatcacaaggtcccagtgatggtgcaggaggtgctaatctaagccgg
catcaggcaaggcttcaagctgctgccatggctgcttccttatatgagaaatcatttagt
tatcttccagcaagttccttctggccttcaggttatgcatcaaatcacatggaaaatcct
catttggaggcatttagtggtgtgatgaaacagcctaccggagaagcagtggcttctggg
ccatcgctgcaattcaatacacatcctagatctattccttttccggcttctgattccagc
attgcctccagccagacatcctccagcaatcaagatgtgcagctttcgctattgaaggca
catgaagatgttatccgtagccagattcagtttctacagacacagttgcaggctttagag
cagcaggcggcataccagtctgagacgtcatccggagatgtagttcctgccgtcgctgat
ctcaagggaaaatcggtcatcacatctgatgctgccacatctaaacctgatggtgctcat
caagaggagtctgaaaaagtttaa
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