Musa acuminata (dessert banana): 135607419
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Entry
135607419 CDS
T03447
Name
(RefSeq) ATP-dependent helicase BRM-like
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
135607419
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mus03021
]
135607419
03036 Chromosome and associated proteins [BR:
mus03036
]
135607419
Transcription machinery [BR:
mus03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
135607419
Chromosome and associated proteins [BR:
mus03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
135607419
Chromatin remodeling factors
BAF complex
135607419
PBAF complex
135607419
GBAF(ncBAF) complex
135607419
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
QLQ
ResIII
DEAD
Bromodomain
AAA_14
HDA2-3
Nup214_FG
Motif
Other DBs
NCBI-GeneID:
135607419
NCBI-ProteinID:
XP_064955294
LinkDB
All DBs
Position
BXJ2-3:complement(12452511..12477937)
Genome browser
AA seq
2274 aa
AA seq
DB search
MQSGNVRNPAGTPPPGRSPPSSAASPSSSSSAVSAPNHLGFESLQHQQQQLAYRQALQQQ
EHQQKLQQLRKSEVDKSLLTYQSTGTHGPTSGTGFPTTPGPSHLSQLSKKYGNIPHHPGA
VHVPEENENKGQGVGHQMQNPLHQAYLQFAFQAAQKSHGNSVVLQQGKMNMAGPSQRDQD
MLMNKLKMQELMSLQIVNKSQMPMLNRTAEQFTYAEKQLELGHTSTDQRNDLKPLPADGQ
LASVNMVVPGQPLQLLHSQASVQNSANNQLEMAQVQAMQVWAKEHNIDLSVPANLSLISQ
ILPFWQSNRMAVMQKPNETRPTAQQSCFPSLMQPAMPSPIGTENSANVNSPSDLPGRYSS
YKCHQALPSSSLPGGGDTIGINPNTLQIQRQVAGHNRINQNEGTVKTPITTECGGQVTHL
TNSSGNLNQTLEKSDAKNTFTGSEMQQMQNLRSLQQLDRSSFLPAVPRNGTVGTQVPSEG
GFAQIAKQRIGFTKQQLHVLKAQILAFRRLKRGERSLPPEVLQAIADTPVDSQPKHGHIQ
SGVNQDLVTNAKSNDNKHRRHVESNDQAQRSAPMSEGHMQLKDESFTGEEKAASVNQMQG
TAGLEREAVCKGSIGKSDDSSSIVKSDHEVEKGSQDLSSRGDYYIDKGKPVPVDGTIMVP
EQLKKPASTSSTTPPRDGISRKYHGPIFDFPSFTRKHDSLGSTTANYSTNLTLAYDIKDL
LFEEGKIVFNKKKVENLKKISRLLTVNLERRRIKPDLVIRLQIEERKLKLLDLQARLRDE
VEQQQQEIMAMPDRPYRKFVRQCEQQRAELTRQVQQSQKASREKQLKSIFQWRKKLLEAH
WAIRDARTARNRGIAKYHERMLREFSKRKDEDRNKRMEALKNNDVDRYREMLLEQQTNIQ
GDAAQRYAVLSSFLSQTEEYLRKLGSKITASKSHQEVEEAANAAAAAARAQGLSSEEVRT
AASCAGEEVMIRNRFSEMNAPKDSSANKYYNLAHAVSERVIRQPSMLRAGTLRDYQLVGL
QWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKRNYGPHLIIVPNAVLVNWKSEL
LNWLPSISCIFYVGGKEERSKLFSQEVCAVKFNVLVTTYEFIMYDRSKLSKIDWKYIIID
EAQRMKNRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNRKAFHDW
FSKPFQKDGPPQNQEEDEWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSLPRKVSIVL
RCRMSAIQGAIYDWIKSTGTLRVDPEDEMRRVQKNPLYQVKMYKNLHNRCMELRKVCNHP
LLNYPYFSNYSKDFIVRSCGKLWILDRILIKLQRAGHRVLLFSTMTKLLDILEEYLQWRR
LVYRRIDGTTSLEDRESAIVDFNSPDSDCFIFLLSIRAAGRGLNLQTADTVVIYDPDPNP
QNEEQAVARAHRIGQKREVKVIYMEAVVDKTSSYQKEDELSSGVAGESEDDLAGKDRYIG
SIESLIRNNIQQYKMDMADEVINAGRFDQRTTHEERRITLEMLLHDEERYQETVHDVPSL
QEVNRMIARSEEEVELFDQMDEDLDWTADMVKHNEVPKWLRVSSCEVEAVAANLSKKPSK
NILSGNIELEPSAIFSGLSPSKTERRRGRPKSSTAKNIPIYQELDDEDAEDSDIDSEERN
AFEEEGEIGEFEDEEFNVADDVLPVHKDQEVEGMDYNNGAYEFSQTMDGGQNVHAFEEAD
STGSSSGSRRLPQPETPLLVSQKFGSLSALDAKPGLPSKKMADELEEGEIAVSGDSHMDL
QQSGSWLHDHDDGEDEQVLQPKIKRKRSMRMRPRCFSERTDEKSSSERIFPHHSSRLPLQ
VDHEYAMPARTEKLKAFAEVGLQRHVTGSSSLKHRHNVPSKKISPQQKSGRLSYFSGSAE
DGNEHSRESWNGRTNSSGGPTFVGVKMSDSTQRKCKNVISKLQRRINKDGNQIVPILYDW
WRNANSSLAIPLVVHGTLDLQIIELRVDNLEYFGVTDFIADVQLMLKNIVRHFNYSSEVR
SEAEKLRDLFFHIMKIAFPDSDFREAKNAVTFSSPGGSVTMQPQKLPSSSKTKQQGPTNK
LETVTVRDKVVPHRATPMGGEERTKSSSSKHQKESRSVSGSLKEQAPECSQFLTHPGDLV
ICKKKRKERDKSAVKQRTGSASPSNPGRMGPLSPPSTGRVASAPSPTMNRSSSLSFGKDS
RHARQAKHPSVWPHRGMQQLGDGDGGRHGIGDVQWAKPIKRMRTDTGKRRPSHM
NT seq
6825 nt
NT seq
+upstream
nt +downstream
nt
atgcaatccgggaacgtccggaatccggcgggcaccccgcctccagggcggtcgccgcca
tcgtccgccgcgtcaccttcctcctcctcttccgccgtctccgctccgaaccacctgggc
ttcgaatctcttcagcaccagcaacagcagctggcatataggcaggctttacagcaacag
gaacaccaacagaaactgcagcagctaagaaaatctgaagttgataaatcccttcttact
tatcaatctactggtacacatgggcccacttcaggaactggttttccgacaacccctgga
ccttcacatctgtctcagttgtcaaagaagtatggtaacatacctcatcatcctggtgct
gttcatgtccccgaggaaaatgaaaataaagggcagggtgtaggacaccaaatgcagaat
ccacttcatcaagcttacctccaatttgcttttcaagctgctcagaagtctcatgggaat
tcagtagtactgcagcaaggtaaaatgaatatggctggtccatctcaaagggatcaggac
atgcttatgaacaaattaaagatgcaggaacttatgtcactccagatagttaataagtcg
cagatgcctatgcttaataggacagccgaacaattcacatatgctgagaagcagttggaa
ctaggtcatactagcactgatcaaagaaatgatctgaagcctctcccagcagacgggcag
ttagcatctgttaacatggtagtgccaggacagccacttcagttgctgcattctcaagct
agtgtgcagaattctgcaaacaatcaattagagatggcacaggtacaagcaatgcaggtg
tgggcaaaggaacataatattgatctgtctgttcctgctaatttgagtttgatttctcaa
atcctacccttttggcagtccaacagaatggctgtgatgcagaagccaaatgaaactagg
cccacagcacaacaatcttgttttccgtctttgatgcaaccagcaatgccatcgccaatt
ggcactgaaaattcagcaaatgttaactctccaagtgatttgcctggtcgatatagctct
tataaatgtcatcaggcacttccgtccagttcgctccctggtggtggtgataccattggc
atcaatcccaatactttgcaaattcagcggcaggttgctggtcataacaggatcaaccag
aatgaggggactgttaaaaccccaattaccactgaatgtggtgggcaagttacacattta
acaaattcgtctggtaacttgaatcagaccctggaaaagtctgatgctaaaaacactttt
acaggcagtgaaatgcagcaaatgcagaatttgaggtccttgcagcagttggatagatcc
agtttcttacccgcggttcctagaaatggtactgtgggtactcaagttccaagcgaaggt
ggatttgctcagatagcaaaacaacgtattgggttcacaaagcaacagcttcatgttctg
aaggcccaaatcttagcttttaggcgtctcaagcgtggtgaacgaagtctaccacctgaa
gttcttcaagcaattgcagataccccggttgattctcagccaaagcatggtcacattcag
tctggagttaaccaggacttggtaacgaatgccaagagcaatgataacaaacataggaga
catgtggagtctaacgatcaggctcagcggtctgctccaatgagtgaaggccacatgcag
ctgaaggatgaaagctttactggagaagagaaagctgctagtgtcaatcaaatgcaaggt
acagcaggtttagagagggaagctgtatgcaagggatctattggcaagtcagacgatagc
agttctattgtcaaatctgaccacgaggttgaaaagggaagtcaagatttatctagcaga
ggtgactactatattgacaagggaaagcctgtaccagtggatggcacaataatggttcct
gagcagttgaaaaagcctgcctcaacaagtagcacgacacctcccagagatggtatttca
cgaaagtatcatggtccaatttttgatttcccatcatttacaaggaaacatgactcctta
ggatcaacaactgcaaattactctactaatttgacattggcttatgacattaaagatttg
ctatttgaggaaggtaagattgtgtttaacaagaaaaaggtagagaatctaaagaagatt
agtcggttgcttactgttaatttagaaaggagaagaattaagcccgatcttgtgatacgg
ttgcaaattgaagagagaaaactcaagcttcttgatcttcaggctcgtctaagggatgaa
gttgaacaacaacaacaggagataatggcaatgcctgatcggccataccgcaagtttgtt
aggcaatgtgaacagcaacgtgctgagctaacaaggcaagttcaacagtcgcaaaaagca
tccagagagaaacaactgaagtctatctttcaatggcgtaaaaagctcttagaggctcac
tgggctattcgtgatgctcggactgcacgaaacagagggattgcaaaatatcatgagcgc
atgttaagggagttttcaaagagaaaggatgaggacagaaataaaagaatggaagcattg
aagaacaatgatgtggataggtatcgtgaaatgttactagagcagcagacgaacatccaa
ggagatgcagcccaacgttatgctgttctttcttcctttttatctcagactgaagagtat
cttcggaagcttggcagtaaaattacagcttcaaagagtcaccaagaggttgaagaggca
gcaaatgctgctgcagctgctgcacgagctcagggtctctcatctgaagaggtcagaaca
gcagcatcatgtgcgggagaggaggtaatgataagaaacaggttctctgaaatgaatgct
ccaaaggacagctctgctaacaagtattataatttggctcatgctgtgagtgaaagggtc
ataaggcaaccctcaatgctacgagctggaacattaagagactatcagcttgtcgggctg
cagtggatgctttccttgtacaataacaagttgaatggaattttggcggatgagatgggt
cttggcaagactgtccaggtaatggcattgattgcttacctgatggagttcaagcggaat
tatggtccacatttaattatagttccaaatgctgttttagtgaactggaagagtgagctg
ctaaattggctgccgtctatatcatgcattttttacgttggcgggaaggaggaaaggtct
aagcttttctctcaggaagtttgtgctgtcaagtttaatgtgctggtaacaacctatgag
tttatcatgtatgatcgttctaagctatcaaaaattgactggaagtatataatcatcgat
gaagcacaaaggatgaagaatagggagtcagttttggcacgcgatcttgatagatatcgt
tgccagcgaagactgctacttactggaacacctttgcagaatgatcttaaggagctctgg
tccctcttaaatctacttcttccagaagtttttgataatcgcaaggcatttcatgattgg
ttctcaaagccttttcagaaagatggtccaccacaaaatcaggaggaagatgagtggctt
gagactgagaagaaggtgataatcatccatcggctgcatcagattctggaacctttcatg
ctaagaaggcgtgttgaggatgtcgaaggttcacttcctcgaaaggtctccattgttctg
agatgcagaatgtcagctatccagggtgccatttatgactggattaaatctactggtact
ctcagggttgatcctgaggatgagatgcgccgagttcaaaagaatccgctgtaccaggtt
aaaatgtacaagaatcttcacaatagatgtatggagttgaggaaagtttgtaatcatcct
ttgcttaactatccttattttagtaactattccaaggacttcattgttagatcatgtggg
aaactttggattcttgataggattctcataaaacttcagagagcaggtcatcgtgtactt
ctgtttagtaccatgactaaacttcttgatatattagaggaatacctacaatggcggaga
cttgtctatagacgaatagatggtacaacaagcctcgaggaccgagagtcagcaatcgtg
gatttcaacagccctgactctgattgttttatctttttgcttagcattcgtgctgctgga
agaggtctaaatctccagactgcagatacagttgtaatatatgacccagatccaaatccc
cagaatgaagagcaggcagtggcaagagctcaccgaattggacaaaagagagaagtgaaa
gtcatatacatggaagctgttgttgataaaacctcgagctatcaaaaagaagatgaattg
agcagtggagtggcaggagaatcagaggatgatcttgctggtaaagatcgctatattggg
tcaattgagagccttatacggaacaatatccaacaatataagatggacatggctgatgag
gtcataaatgctggtcgttttgatcaaagaacaacacatgaggaaagacggattactttg
gagatgctacttcatgatgaagagagatatcaagaaactgtgcatgatgttccttctttg
caggaagtgaatcgtatgattgctcgtagtgaagaggaagttgaattattcgatcaaatg
gatgaagatcttgattggactgcagatatggtaaaacacaatgaagtcccaaaatggctt
cgagttagttcatgtgaggtagaagctgttgctgctaatttatcaaagaagccttcaaag
aacatcttatctggcaatattgaactggaaccaagtgcaatattttctggtttgtcccct
agtaaaactgaaaggaggaggggccgccctaagagttcaactgccaaaaacatccctatc
taccaggaattggatgatgaagatgctgaggattcagatattgactcagaggagaggaat
gcatttgaagaagagggagaaattggagaattcgaagatgaagagttcaatgttgccgat
gatgtgcttccagtccacaaggatcaagaagtggagggaatggattataataatggtgca
tatgagttctcgcaaacaatggacggtggccaaaatgttcatgcatttgaagaagctgat
tccacaggatcatcttctggaagtcgtagattgccacaacccgaaactcctttattggtt
tcacaaaagtttggatcactttctgctttagatgccaaaccaggtcttccttcaaaaaag
atggctgatgagctagaagaaggtgaaattgcagtatcaggtgactcccacatggatctg
caacaatcaggtagttggcttcatgaccatgatgacggagaggatgaacaggttttgcaa
ccaaaaataaagcgtaaacggagcatgcgtatgcgcccaagatgtttttctgaaagaact
gatgaaaaatctagcagcgagaggatcttcccccaccattcttcaaggttgcccttgcag
gttgaccatgaatatgccatgccagccagaactgaaaagctcaaagcatttgctgaggtt
ggtttgcaaaggcatgtgacaggtagctcatcattgaagcacagacataatgtcccatct
aaaaagatttcacctcagcagaagtctggcaggttaagttacttttctgggtctgcagaa
gatggtaatgaacattctagggaaagttggaatggtaggaccaacagctctggtggccca
acctttgtgggcgtaaaaatgtccgacagtacacaaagaaagtgcaagaatgtcattagc
aagctgcagaggagaataaataaagatggtaatcaaattgtgccaattttgtatgattgg
tggagaaatgcgaactcaagtttggccattcctctcgtggtgcatggtaccctagatctt
cagataattgaattgcgtgtggacaacttagagtactttggtgtgacagactttatagca
gatgtgcagttgatgctgaaaaatatagttcgacatttcaactattcttctgaggtgaga
agtgaagcagagaagcttcgagatctgttctttcatataatgaagattgcatttccagat
tcagattttcgagaagccaagaatgcagtgaccttttctagtcccgggggatctgtgaca
atgcaacctcagaagctgccttcctccagcaaaaccaagcagcaaggcccaactaacaag
ttggagacagtcaccgtccgggataaggtcgtaccccatagggccactcctatgggcggc
gaagagaggaccaagtcgtcttcttccaagcaccagaaggagtcaaggtcagtttctggc
agcttgaaggagcaggcacctgaatgttcccagtttttgacgcacccgggtgatctggtt
atctgcaagaagaagaggaaagaaagagataaatctgctgtcaagcaaagaactggttct
gcatccccatccaaccctggtcgaatgggcccactgtctccacccagtacgggacgtgtg
gcctctgcaccatcgcccacgatgaacagaagttccagtttatcatttgggaaagattca
cgtcatgctcgacaggcgaagcatccatcggtctggccacaccgtgggatgcagcagctt
ggtgatggagatggtggccgtcatggcataggagatgtacaatgggcgaagcctataaag
agaatgaggacagacaccggcaaaagacggccgagtcatatgtga
DBGET
integrated database retrieval system