Musa acuminata (dessert banana): 135607419
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Entry
135607419 CDS
T03447
Name
(RefSeq) ATP-dependent helicase BRM-like
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
135607419
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mus03021
]
135607419
03036 Chromosome and associated proteins [BR:
mus03036
]
135607419
Transcription machinery [BR:
mus03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
135607419
Chromosome and associated proteins [BR:
mus03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
135607419
Chromatin remodeling factors
BAF complex
135607419
PBAF complex
135607419
GBAF(ncBAF) complex
135607419
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
QLQ
ResIII
DEAD
Bromodomain
AAA_14
HDA2-3
Nup214_FG
Motif
Other DBs
NCBI-GeneID:
135607419
NCBI-ProteinID:
XP_064955294
LinkDB
All DBs
Position
BXJ2-3:complement(12452511..12477937)
Genome browser
AA seq
2274 aa
AA seq
DB search
MQSGNVRNPAGTPPPGRSPPSSAASPSSSSSAVSAPNHLGFESLQHQQQQLAYRQALQQQ
EHQQKLQQLRKSEVDKSLLTYQSTGTHGPTSGTGFPTTPGPSHLSQLSKKYGNIPHHPGA
VHVPEENENKGQGVGHQMQNPLHQAYLQFAFQAAQKSHGNSVVLQQGKMNMAGPSQRDQD
MLMNKLKMQELMSLQIVNKSQMPMLNRTAEQFTYAEKQLELGHTSTDQRNDLKPLPADGQ
LASVNMVVPGQPLQLLHSQASVQNSANNQLEMAQVQAMQVWAKEHNIDLSVPANLSLISQ
ILPFWQSNRMAVMQKPNETRPTAQQSCFPSLMQPAMPSPIGTENSANVNSPSDLPGRYSS
YKCHQALPSSSLPGGGDTIGINPNTLQIQRQVAGHNRINQNEGTVKTPITTECGGQVTHL
TNSSGNLNQTLEKSDAKNTFTGSEMQQMQNLRSLQQLDRSSFLPAVPRNGTVGTQVPSEG
GFAQIAKQRIGFTKQQLHVLKAQILAFRRLKRGERSLPPEVLQAIADTPVDSQPKHGHIQ
SGVNQDLVTNAKSNDNKHRRHVESNDQAQRSAPMSEGHMQLKDESFTGEEKAASVNQMQG
TAGLEREAVCKGSIGKSDDSSSIVKSDHEVEKGSQDLSSRGDYYIDKGKPVPVDGTIMVP
EQLKKPASTSSTTPPRDGISRKYHGPIFDFPSFTRKHDSLGSTTANYSTNLTLAYDIKDL
LFEEGKIVFNKKKVENLKKISRLLTVNLERRRIKPDLVIRLQIEERKLKLLDLQARLRDE
VEQQQQEIMAMPDRPYRKFVRQCEQQRAELTRQVQQSQKASREKQLKSIFQWRKKLLEAH
WAIRDARTARNRGIAKYHERMLREFSKRKDEDRNKRMEALKNNDVDRYREMLLEQQTNIQ
GDAAQRYAVLSSFLSQTEEYLRKLGSKITASKSHQEVEEAANAAAAAARAQGLSSEEVRT
AASCAGEEVMIRNRFSEMNAPKDSSANKYYNLAHAVSERVIRQPSMLRAGTLRDYQLVGL
QWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKRNYGPHLIIVPNAVLVNWKSEL
LNWLPSISCIFYVGGKEERSKLFSQEVCAVKFNVLVTTYEFIMYDRSKLSKIDWKYIIID
EAQRMKNRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNRKAFHDW
FSKPFQKDGPPQNQEEDEWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSLPRKVSIVL
RCRMSAIQGAIYDWIKSTGTLRVDPEDEMRRVQKNPLYQVKMYKNLHNRCMELRKVCNHP
LLNYPYFSNYSKDFIVRSCGKLWILDRILIKLQRAGHRVLLFSTMTKLLDILEEYLQWRR
LVYRRIDGTTSLEDRESAIVDFNSPDSDCFIFLLSIRAAGRGLNLQTADTVVIYDPDPNP
QNEEQAVARAHRIGQKREVKVIYMEAVVDKTSSYQKEDELSSGVAGESEDDLAGKDRYIG
SIESLIRNNIQQYKMDMADEVINAGRFDQRTTHEERRITLEMLLHDEERYQETVHDVPSL
QEVNRMIARSEEEVELFDQMDEDLDWTADMVKHNEVPKWLRVSSCEVEAVAANLSKKPSK
NILSGNIELEPSAIFSGLSPSKTERRRGRPKSSTAKNIPIYQELDDEDAEDSDIDSEERN
AFEEEGEIGEFEDEEFNVADDVLPVHKDQEVEGMDYNNGAYEFSQTMDGGQNVHAFEEAD
STGSSSGSRRLPQPETPLLVSQKFGSLSALDAKPGLPSKKMADELEEGEIAVSGDSHMDL
QQSGSWLHDHDDGEDEQVLQPKIKRKRSMRMRPRCFSERTDEKSSSERIFPHHSSRLPLQ
VDHEYAMPARTEKLKAFAEVGLQRHVTGSSSLKHRHNVPSKKISPQQKSGRLSYFSGSAE
DGNEHSRESWNGRTNSSGGPTFVGVKMSDSTQRKCKNVISKLQRRINKDGNQIVPILYDW
WRNANSSLAIPLVVHGTLDLQIIELRVDNLEYFGVTDFIADVQLMLKNIVRHFNYSSEVR
SEAEKLRDLFFHIMKIAFPDSDFREAKNAVTFSSPGGSVTMQPQKLPSSSKTKQQGPTNK
LETVTVRDKVVPHRATPMGGEERTKSSSSKHQKESRSVSGSLKEQAPECSQFLTHPGDLV
ICKKKRKERDKSAVKQRTGSASPSNPGRMGPLSPPSTGRVASAPSPTMNRSSSLSFGKDS
RHARQAKHPSVWPHRGMQQLGDGDGGRHGIGDVQWAKPIKRMRTDTGKRRPSHM
NT seq
6825 nt
NT seq
+upstream
nt +downstream
nt
atgcaatccgggaacgtccggaatccggcgggcaccccgcctccagggcggtcgccgcca
tcgtccgccgcgtcaccttcctcctcctcttccgccgtctccgctccgaaccacctgggc
ttcgaatctcttcagcaccagcaacagcagctggcatataggcaggctttacagcaacag
gaacaccaacagaaactgcagcagctaagaaaatctgaagttgataaatcccttcttact
tatcaatctactggtacacatgggcccacttcaggaactggttttccgacaacccctgga
ccttcacatctgtctcagttgtcaaagaagtatggtaacatacctcatcatcctggtgct
gttcatgtccccgaggaaaatgaaaataaagggcagggtgtaggacaccaaatgcagaat
ccacttcatcaagcttacctccaatttgcttttcaagctgctcagaagtctcatgggaat
tcagtagtactgcagcaaggtaaaatgaatatggctggtccatctcaaagggatcaggac
atgcttatgaacaaattaaagatgcaggaacttatgtcactccagatagttaataagtcg
cagatgcctatgcttaataggacagccgaacaattcacatatgctgagaagcagttggaa
ctaggtcatactagcactgatcaaagaaatgatctgaagcctctcccagcagacgggcag
ttagcatctgttaacatggtagtgccaggacagccacttcagttgctgcattctcaagct
agtgtgcagaattctgcaaacaatcaattagagatggcacaggtacaagcaatgcaggtg
tgggcaaaggaacataatattgatctgtctgttcctgctaatttgagtttgatttctcaa
atcctacccttttggcagtccaacagaatggctgtgatgcagaagccaaatgaaactagg
cccacagcacaacaatcttgttttccgtctttgatgcaaccagcaatgccatcgccaatt
ggcactgaaaattcagcaaatgttaactctccaagtgatttgcctggtcgatatagctct
tataaatgtcatcaggcacttccgtccagttcgctccctggtggtggtgataccattggc
atcaatcccaatactttgcaaattcagcggcaggttgctggtcataacaggatcaaccag
aatgaggggactgttaaaaccccaattaccactgaatgtggtgggcaagttacacattta
acaaattcgtctggtaacttgaatcagaccctggaaaagtctgatgctaaaaacactttt
acaggcagtgaaatgcagcaaatgcagaatttgaggtccttgcagcagttggatagatcc
agtttcttacccgcggttcctagaaatggtactgtgggtactcaagttccaagcgaaggt
ggatttgctcagatagcaaaacaacgtattgggttcacaaagcaacagcttcatgttctg
aaggcccaaatcttagcttttaggcgtctcaagcgtggtgaacgaagtctaccacctgaa
gttcttcaagcaattgcagataccccggttgattctcagccaaagcatggtcacattcag
tctggagttaaccaggacttggtaacgaatgccaagagcaatgataacaaacataggaga
catgtggagtctaacgatcaggctcagcggtctgctccaatgagtgaaggccacatgcag
ctgaaggatgaaagctttactggagaagagaaagctgctagtgtcaatcaaatgcaaggt
acagcaggtttagagagggaagctgtatgcaagggatctattggcaagtcagacgatagc
agttctattgtcaaatctgaccacgaggttgaaaagggaagtcaagatttatctagcaga
ggtgactactatattgacaagggaaagcctgtaccagtggatggcacaataatggttcct
gagcagttgaaaaagcctgcctcaacaagtagcacgacacctcccagagatggtatttca
cgaaagtatcatggtccaatttttgatttcccatcatttacaaggaaacatgactcctta
ggatcaacaactgcaaattactctactaatttgacattggcttatgacattaaagatttg
ctatttgaggaaggtaagattgtgtttaacaagaaaaaggtagagaatctaaagaagatt
agtcggttgcttactgttaatttagaaaggagaagaattaagcccgatcttgtgatacgg
ttgcaaattgaagagagaaaactcaagcttcttgatcttcaggctcgtctaagggatgaa
gttgaacaacaacaacaggagataatggcaatgcctgatcggccataccgcaagtttgtt
aggcaatgtgaacagcaacgtgctgagctaacaaggcaagttcaacagtcgcaaaaagca
tccagagagaaacaactgaagtctatctttcaatggcgtaaaaagctcttagaggctcac
tgggctattcgtgatgctcggactgcacgaaacagagggattgcaaaatatcatgagcgc
atgttaagggagttttcaaagagaaaggatgaggacagaaataaaagaatggaagcattg
aagaacaatgatgtggataggtatcgtgaaatgttactagagcagcagacgaacatccaa
ggagatgcagcccaacgttatgctgttctttcttcctttttatctcagactgaagagtat
cttcggaagcttggcagtaaaattacagcttcaaagagtcaccaagaggttgaagaggca
gcaaatgctgctgcagctgctgcacgagctcagggtctctcatctgaagaggtcagaaca
gcagcatcatgtgcgggagaggaggtaatgataagaaacaggttctctgaaatgaatgct
ccaaaggacagctctgctaacaagtattataatttggctcatgctgtgagtgaaagggtc
ataaggcaaccctcaatgctacgagctggaacattaagagactatcagcttgtcgggctg
cagtggatgctttccttgtacaataacaagttgaatggaattttggcggatgagatgggt
cttggcaagactgtccaggtaatggcattgattgcttacctgatggagttcaagcggaat
tatggtccacatttaattatagttccaaatgctgttttagtgaactggaagagtgagctg
ctaaattggctgccgtctatatcatgcattttttacgttggcgggaaggaggaaaggtct
aagcttttctctcaggaagtttgtgctgtcaagtttaatgtgctggtaacaacctatgag
tttatcatgtatgatcgttctaagctatcaaaaattgactggaagtatataatcatcgat
gaagcacaaaggatgaagaatagggagtcagttttggcacgcgatcttgatagatatcgt
tgccagcgaagactgctacttactggaacacctttgcagaatgatcttaaggagctctgg
tccctcttaaatctacttcttccagaagtttttgataatcgcaaggcatttcatgattgg
ttctcaaagccttttcagaaagatggtccaccacaaaatcaggaggaagatgagtggctt
gagactgagaagaaggtgataatcatccatcggctgcatcagattctggaacctttcatg
ctaagaaggcgtgttgaggatgtcgaaggttcacttcctcgaaaggtctccattgttctg
agatgcagaatgtcagctatccagggtgccatttatgactggattaaatctactggtact
ctcagggttgatcctgaggatgagatgcgccgagttcaaaagaatccgctgtaccaggtt
aaaatgtacaagaatcttcacaatagatgtatggagttgaggaaagtttgtaatcatcct
ttgcttaactatccttattttagtaactattccaaggacttcattgttagatcatgtggg
aaactttggattcttgataggattctcataaaacttcagagagcaggtcatcgtgtactt
ctgtttagtaccatgactaaacttcttgatatattagaggaatacctacaatggcggaga
cttgtctatagacgaatagatggtacaacaagcctcgaggaccgagagtcagcaatcgtg
gatttcaacagccctgactctgattgttttatctttttgcttagcattcgtgctgctgga
agaggtctaaatctccagactgcagatacagttgtaatatatgacccagatccaaatccc
cagaatgaagagcaggcagtggcaagagctcaccgaattggacaaaagagagaagtgaaa
gtcatatacatggaagctgttgttgataaaacctcgagctatcaaaaagaagatgaattg
agcagtggagtggcaggagaatcagaggatgatcttgctggtaaagatcgctatattggg
tcaattgagagccttatacggaacaatatccaacaatataagatggacatggctgatgag
gtcataaatgctggtcgttttgatcaaagaacaacacatgaggaaagacggattactttg
gagatgctacttcatgatgaagagagatatcaagaaactgtgcatgatgttccttctttg
caggaagtgaatcgtatgattgctcgtagtgaagaggaagttgaattattcgatcaaatg
gatgaagatcttgattggactgcagatatggtaaaacacaatgaagtcccaaaatggctt
cgagttagttcatgtgaggtagaagctgttgctgctaatttatcaaagaagccttcaaag
aacatcttatctggcaatattgaactggaaccaagtgcaatattttctggtttgtcccct
agtaaaactgaaaggaggaggggccgccctaagagttcaactgccaaaaacatccctatc
taccaggaattggatgatgaagatgctgaggattcagatattgactcagaggagaggaat
gcatttgaagaagagggagaaattggagaattcgaagatgaagagttcaatgttgccgat
gatgtgcttccagtccacaaggatcaagaagtggagggaatggattataataatggtgca
tatgagttctcgcaaacaatggacggtggccaaaatgttcatgcatttgaagaagctgat
tccacaggatcatcttctggaagtcgtagattgccacaacccgaaactcctttattggtt
tcacaaaagtttggatcactttctgctttagatgccaaaccaggtcttccttcaaaaaag
atggctgatgagctagaagaaggtgaaattgcagtatcaggtgactcccacatggatctg
caacaatcaggtagttggcttcatgaccatgatgacggagaggatgaacaggttttgcaa
ccaaaaataaagcgtaaacggagcatgcgtatgcgcccaagatgtttttctgaaagaact
gatgaaaaatctagcagcgagaggatcttcccccaccattcttcaaggttgcccttgcag
gttgaccatgaatatgccatgccagccagaactgaaaagctcaaagcatttgctgaggtt
ggtttgcaaaggcatgtgacaggtagctcatcattgaagcacagacataatgtcccatct
aaaaagatttcacctcagcagaagtctggcaggttaagttacttttctgggtctgcagaa
gatggtaatgaacattctagggaaagttggaatggtaggaccaacagctctggtggccca
acctttgtgggcgtaaaaatgtccgacagtacacaaagaaagtgcaagaatgtcattagc
aagctgcagaggagaataaataaagatggtaatcaaattgtgccaattttgtatgattgg
tggagaaatgcgaactcaagtttggccattcctctcgtggtgcatggtaccctagatctt
cagataattgaattgcgtgtggacaacttagagtactttggtgtgacagactttatagca
gatgtgcagttgatgctgaaaaatatagttcgacatttcaactattcttctgaggtgaga
agtgaagcagagaagcttcgagatctgttctttcatataatgaagattgcatttccagat
tcagattttcgagaagccaagaatgcagtgaccttttctagtcccgggggatctgtgaca
atgcaacctcagaagctgccttcctccagcaaaaccaagcagcaaggcccaactaacaag
ttggagacagtcaccgtccgggataaggtcgtaccccatagggccactcctatgggcggc
gaagagaggaccaagtcgtcttcttccaagcaccagaaggagtcaaggtcagtttctggc
agcttgaaggagcaggcacctgaatgttcccagtttttgacgcacccgggtgatctggtt
atctgcaagaagaagaggaaagaaagagataaatctgctgtcaagcaaagaactggttct
gcatccccatccaaccctggtcgaatgggcccactgtctccacccagtacgggacgtgtg
gcctctgcaccatcgcccacgatgaacagaagttccagtttatcatttgggaaagattca
cgtcatgctcgacaggcgaagcatccatcggtctggccacaccgtgggatgcagcagctt
ggtgatggagatggtggccgtcatggcataggagatgtacaatgggcgaagcctataaag
agaatgaggacagacaccggcaaaagacggccgagtcatatgtga
DBGET
integrated database retrieval system