Musa acuminata (dessert banana): 135607500
Help
Entry
135607500 CDS
T03447
Name
(RefSeq) SWI/SNF complex subunit SWI3B-like isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
135607500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mus03021
]
135607500
03036 Chromosome and associated proteins [BR:
mus03036
]
135607500
Transcription machinery [BR:
mus03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
135607500
Chromosome and associated proteins [BR:
mus03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
135607500
PBAF complex
135607500
GBAF(ncBAF) complex
135607500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
Myb_DNA-binding
SWIRM-assoc_1
Myb_DNA-bind_6
NodS
DUF5945
Motif
Other DBs
NCBI-GeneID:
135607500
NCBI-ProteinID:
XP_064955463
LinkDB
All DBs
Position
BXJ2-3:21642092..21658094
Genome browser
AA seq
504 aa
AA seq
DB search
MASSSPPPAQAPVLSPPNPPRPQQLPQPLPVAAVKSEVPVAEPRDPPASVSSIPLEPSPA
AVAASYTITIPSCSGWFSWDQIHDTERRVLSEFFDGKSASKNPGVYKYYRDSIIRRFRGN
PSRKITFTDARRGLVGDVGSIRRVFDFLEEWGLINYTPLAKPSAKKGEMGDDSEKKETPR
RICSHCKSSCNMACFTTDKADIILCARCFVRGDYRPGLSSTDFKRVDITEETKADWTDKE
TIHLLEAILQYGDDWKKVAEHVGTKSEIDCVARFIKLPFGEQFLGPEEVGEYGKPHQKND
KVVTVPEGENVPEQSLSKRMRLTPLADASNPIMAQVAFLSAMVGSDVAKAVAQAAISSLH
KVDIAGGISASDDRLQSAASNGAKEEGYRIKLSSYVEAVAASNGQTSSDVLNEAVAEAQS
QLKKEEQDVEQYLSDVVQVQMKEIQDKIVHFEELELLLEKERLQLRHMKDLLFADQLAIM
QHKMQLLSKGNEKGEKVKQTNHVP
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgtcgtcgccaccgcctgcgcaggcccccgttctctcgccgccgaacccccct
cggccccagcaactcccccagcctctgcctgtcgccgccgtcaaatccgaggttccggtt
gccgagccccgagatccccccgcctcagtcagttccatcccgctggaaccgtctcccgct
gcggttgccgcctcgtacaccatcaccatccccagctgctccgggtggttctcttgggac
cagatccacgacaccgagcgcagggtcctatcggagttcttcgacgggaagtcggcttcc
aagaaccccggggtgtacaagtactacagggactcgattattagacggttcagggggaac
ccgtcgaggaagatcacgttcaccgacgcccggcgggggttggtcggggatgtcgggtcg
atccgtagggtgtttgatttcctagaagagtggggcctgatcaactacacgcccttggcc
aagccgagcgcgaagaagggggaaatgggcgatgattcggagaagaaggaaactcctagg
aggatctgttcccattgcaaatcctcttgtaacatggcatgcttcaccacggataaggca
gatattatcctatgtgcacgatgctttgttcgcggtgactataggcctggcctcagttca
acagatttcaaaagggttgatatcactgaagaaacaaaggcagattggacagacaaggag
actattcacctacttgaagccattttgcagtatggtgatgattggaagaaggtggcagag
catgttggtaccaaatcagagatagactgtgttgctagattcatcaagttaccctttgga
gaacagtttttggggcctgaagaagttggtgaatatggtaagccacaccagaaaaatgac
aaggtagtaactgtacctgaaggggagaatgttccagagcagagtctttcgaagcggatg
cgtctcacaccactagctgatgcaagcaacccaatcatggcccaggttgctttcttatct
gcaatggtgggttcagatgttgccaaagctgtggctcaagctgccatttcatcattgcat
aaagtggacatagctggtggcatcagtgcaagtgatgataggcttcagtctgctgcctcc
aatggagcaaaggaagaaggctacagaattaaactttcttcctatgtagaagctgttgct
gcttcaaatggtcaaacttcttctgatgtactcaatgaggctgtggcagaggcacagtct
cagcttaagaaggaagagcaggatgtagagcaatatctatctgacgtagtgcaagttcag
atgaaggaaatccaggacaagattgtacactttgaggagttggaattgctcttggaaaaa
gagaggctgcagctgaggcacatgaaagatcttctttttgcagatcagttagccatcatg
caacataagatgcagctcttgtcaaaagggaatgagaaaggggagaaggttaagcagact
aatcatgttccttga
DBGET
integrated database retrieval system
