Musa acuminata (dessert banana): 135607812
Help
Entry
135607812 CDS
T03447
Name
(RefSeq) E3 ubiquitin-protein ligase RDUF1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
mus
Musa acuminata (dessert banana)
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mus04131
]
135607812
04121 Ubiquitin system [BR:
mus04121
]
135607812
Enzymes [BR:
mus01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135607812
Membrane trafficking [BR:
mus04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
135607812
Ubiquitin system [BR:
mus04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
135607812
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
Zn_ribbon_RPAB4
CxC4
FAR1_N
DUF1272
zf-Nse
zf-C3H2C3
Motif
Other DBs
NCBI-GeneID:
135607812
NCBI-ProteinID:
XP_064955981
LinkDB
All DBs
Position
BXJ2-3:33902197..33904135
Genome browser
AA seq
391 aa
AA seq
DB search
MMTSMATAPSYWCYRCSRFVRVWPRDAVVCPDCGGGFLEEVDSPPRPLPVSAASAEPRRR
RFPSAAVDRAGVRRHHRSSTGERSPFNPVIVLRGPPEGRGDADRATGNSFELYYDDGSGS
GLRPLPESMSDFLMGSGFERLLDQLAQIEVNGFGGGGGFEHPPASKAAIESMPTIEIADG
HIMMESHCAVCKDPFELGAEAREMPCKHIYHQDCILPWLLLRNSCPVCRHEMPTDAPERG
MAEPDADEQTHVAGNEEEMVGLTIWRLPGGGFAVGRFTGGRRAGERGLPVVYTEVDGGFS
TGGAPRRISWSSRGSRSREGGGIGQAFRSFFSFFRRLRSSSTTSSRLSSESRSTSTSSLR
SRRHSIFSRSSRSRTTNWALEDGNASAIARW
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgatgacttctatggcgacggcgccgtcgtactggtgttaccgttgcagtcgcttcgtc
agggtttggccccgggacgcagtcgtctgccccgactgcggcggcggcttcctcgaggag
gtggattcgcctccccgcccccttcctgtctctgcagccagcgcggagcctcgtcgccgc
cgcttcccctccgccgccgtcgacagagccggcgttaggcggcaccaccgttcgtccact
ggcgaacgctcccctttcaaccccgtcatcgtcctccgcggtccgcccgaaggtcgaggc
gatgcggatcgtgccaccggcaacagcttcgagctctactatgacgacggctccggatct
ggcctccgccccttgccggaaagcatgtcggacttcttgatgggatctgggtttgagcga
ctactcgaccagctcgcccagatcgaggtcaatggattcggtgggggcggtggcttcgaa
cacccaccggcttcgaaggctgccatcgaatcgatgcccaccatcgagatcgctgacggc
cacatcatgatggaatcccattgtgccgtctgcaaggatccctttgagctcggagctgaa
gcccgtgagatgccctgcaagcacatctaccaccaagattgcatcttgccatggctcttg
ctcagaaattcttgccctgtttgccgccatgagatgccgacagatgcaccggaaaggggt
atggcagaaccggatgccgatgagcagactcacgtcgctggcaacgaggaggagatggtg
gggctcaccatatggaggcttcctggtggtgggtttgccgttgggaggtttactggtggc
aggagagcaggggagaggggacttccagtcgtttacacagaggtggatggtggattcagc
accggtggagcaccgagaagaatatcatggtcctccagagggagtcggtcgagggagggt
ggaggaattggtcaagcattccgcagttttttctcattcttcaggcgtttgagatcttct
tccaccacttcgtcgagattgagctctgaatctcgttcaacctctacctcttctcttaga
agcaggaggcattcaatcttcagtaggagttcgcggagccgcaccactaattgggcattg
gaggatgggaatgcaagtgcaattgcaagatggtga
DBGET
integrated database retrieval system
