Musa acuminata (dessert banana): 135607828
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Entry
135607828 CDS
T03447
Name
(RefSeq) LIMR family protein Os06g0128200-like
KO
K14617
LMBR1 domain-containing protein 1
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus04977
Vitamin digestion and absorption
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
135607828
04980 Cobalamin transport and metabolism
135607828
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mus04131
]
135607828
Membrane trafficking [BR:
mus04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
135607828
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LMBR1
Tetraspanin
CyanoTRADDas_TM
Motif
Other DBs
NCBI-GeneID:
135607828
NCBI-ProteinID:
XP_064956023
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Position
BXJ2-3:complement(34101243..34110284)
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AA seq
509 aa
AA seq
DB search
MGDFNLALLIVAVVVSALVLLVSVYLLVNYQHPDDHNQAYFPKLVVVLGISIAAISILML
PADVANRQACRHAIYNGACSLTLPMKQLWLAVYIADAILVFFVIPFAMFYYEGDQDKGIG
KRLKSALLWVVTSAIVCGLLLGILYGLVGKVDFTVRHLSSSAESFPSSWTGFSRSQPCIS
SSRLCDAYIAPATSEKTWTMRTSFPEYVVALATIVGSVLFTIFGGVGIACLPLGLIFSFI
RRPKAVITRSQYIKGATDLGKKARELKKTIETLHQEERSGSKGRKWRKNLKEAEKELFLL
EDDMKALEEMYPQGEQAETVWALTVLGYLAKFVLGVVGLIVSVAWVAHIVIYLLINPPLS
PFLNEVFIKLDSVWGLLGTAAFAIFCFYLLLAVIAGEMMLGLKLVFFTIHPMKWGGTLMN
SFLFNVGLILLCSISVIQFCASAFAYYSQATAAQEIFGHTLQSLRGIKYLYKYNVFQYGF
VGFAVLTLFYYAAFGWRKRKPTGRFQFSN
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgggggatttcaacctggcgctgctgatcgtggcggtggtggtatctgcgctggtgctc
ctggtgagcgtctacctcctcgtcaactatcagcacccggacgaccacaaccaggcctac
ttccccaagctcgtcgtcgtccttggcatctcgatcgccgcgatctccatcctcatgcta
cccgccgacgtcgccaaccgccaggcctgccggcacgccatctataacggtgcatgctcc
ctcaccctcccaatgaagcagctctggctcgccgtctacatcgccgatgccatcctcgtc
ttcttcgtcatccccttcgccatgttctactacgagggcgaccaggataaaggcatcggg
aagcggttgaagagcgcgctgttgtgggtcgtgacctcggccatcgtctgtgggcttctg
cttggaattctctatggactagtaggtaaagtggactttactgttaggcatctctcttcg
tcagcggaaagtttcccaagttcttggacaggattctcgagatctcaaccttgtataagc
tcaagtcgcctgtgtgatgcctatatagcacctgctacttcagaaaaaacttggacaatg
cgaaccagcttcccagaatacgtggttgctcttgcaaccattgttggatcagtgcttttt
acaatatttggtggagttggaattgcttgtcttccactgggcctcatattttcattcata
cggcgtcccaaggctgtcattactcgctcacagtatataaagggggcaactgatttggga
aagaaagctagagaactgaagaaaacaattgaaactctccatcaggaggagagaagtgga
tctaagggaagaaaatggcgcaaaaatctgaaggaagctgaaaaggagttgtttctcttg
gaagatgacatgaaagctctggaggaaatgtatcctcaaggagagcaggcagagactgtc
tgggctttaacagttcttggctacttagcaaaatttgtacttggtgttgttgggttgatt
gtttcggtggcttgggttgcacacattgtgatatacttgctaattaaccctccactttct
cctttcttaaatgaagtgttcatcaagttggatagcgtatggggtttgcttggtacagca
gcatttgcaattttctgcttttaccttcttcttgcagtgatagctggtgaaatgatgctt
ggtctgaaattagtttttttcaccatccatccaatgaagtggggaggaacattgatgaac
tcattcctctttaatgtgggattgattctactttgctccatcagtgtgattcagttctgc
gcttccgcttttgcttactattcacaagcaactgctgcacaggagatatttggccataca
ttgcagtctcttcgtggaatcaagtacctgtacaagtataatgtatttcagtatggtttt
gtcggctttgcagtactcacactcttctattatgctgcatttggatggaggaaaagaaaa
ccaaccggcagattccagttctctaattga
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