Musa acuminata (dessert banana): 135607855
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Entry
135607855 CDS
T03447
Name
(RefSeq) zinc finger CCCH domain-containing protein 27-like
KO
K13192
RNA-binding protein 26
Organism
mus
Musa acuminata (dessert banana)
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mus01009
]
135607855
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mus03019
]
135607855
03041 Spliceosome [BR:
mus03041
]
135607855
Protein phosphatases and associated proteins [BR:
mus01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
135607855
Messenger RNA biogenesis [BR:
mus03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
135607855
Spliceosome [BR:
mus03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
135607855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glutaredoxin
RRM_1
Nup35_RRM_2
RRM_Nup35
PHM7_cyt
GST_N_2
zf_CCCH_4
Motif
Other DBs
NCBI-GeneID:
135607855
NCBI-ProteinID:
XP_064956088
LinkDB
All DBs
Position
BXJ2-3:34441304..34452267
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AA seq
1047 aa
AA seq
DB search
MALAKAKEFVSSAPVVVFSKTNCAHCEWVKVLLTQLGVGFKVIELDLESDGSDLQSALAE
WTAQRKLPIVFIGGNHIGGCERTKAFFMRMLHALEDASMVKIGEHLHIIEKLKLSSPPAV
DTVQLRSQLPTDKSHSVSVTPVIDSEDQEVSDDDDRNHKHRRREAQANTFGNDVQEPSMR
QINRKRNRPLESRKMFHDSDNNSNIERDVSSSFEKRRPIFTPATGRPPVGKGRGRGRGRS
IVSWSQQDCRFNPIDTLDFASQVVSQGLPTHPGLFVGTGIPNAATTQNASWGAYGFVPGM
SNRILDPLQPLGLQGTLQSTIAPLFNMGMPRQRCRDFDEQGFCLRGDMCPMEHGVNRIVV
EDVQSLSQFNLPVSDPNSNALGIQSGSGSLPSIRASPGLFTGSKFVPAKDGKPILSDDAL
KLSGVSSASVVAEADVYDPDQPLWNNKCSETSGTGLMLPLLNNDEPLWTLDSSQQSLVPS
NGFQNEQGSRPFRENIGTQNTNSSVWGRIRQNNRSEMGIKTNNNSVSTSHISDEMKEDNE
KSTVKTSSIPEKQNTAEMNQKAIVRQSLPRLYADSSRHNGRMSQKASRTLYVHGIPEKNN
TKDALFSHFQKFGEVVDIYIPLNSEKAFVQFSTREEAEAALEAPDAVMGNRFIKLWWANR
DRIHDAGKSSHHSKLPLSSSMGVSGLSSYLSGTDKEEGNLKSTVPTGSKTPSELSVTVAG
PKGLSANAPKIASPMPKKLDGLELLKEELRKKQEILAQKRDEFRRQLDKFEKQSISVRRG
EVVSEQAARKLKVDMGNETAKSRTAIAPITTAITTAGTLQEVEKTRKSEVVLVSPTSIAN
STILQNCNTEQTSHPSMPKSDMCRLDNQSTSFRILPLPADLADVAILQDHFSSFGDLASI
VLEEHGERSDNDGMKTPENFCAHITFTSCDSAERAYVGGQCWQGHSLHFMWLSESDNSNK
VCDSQETLGPPGSSSADIQDGPVKSVMSSPTEGTSLDGVICKVTVVEVESNSGVEDVHCY
HSDMLNTTASRSNVSVAEDKMSIDLAK
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcgccaaggccaaggaattcgtctcctccgctcccgtcgtcgtattcagcaag
acaaactgcgcacactgtgagtgggtaaaggtgttgctcacacaattaggagttggtttt
aaagtgattgagttggatcttgaaagtgatggatctgatttacaatctgcactagcagaa
tggactgctcaaaggaaattgccgattgtttttattggtggaaatcacattggtggttgt
gaacgtacaaaagccttcttcatgagaatgctacatgccctcgaagatgcttcaatggtg
aagattggtgagcaccttcatattattgagaagttaaagctgtcttcgcctcctgctgtc
gatactgtacaactgagaagtcagttgcctactgataaaagccactcagtgtctgtcaca
ccagttattgattctgaagaccaagaagttagtgatgatgatgatcgcaaccataaacat
cgtaggagggaggctcaagccaatacttttggcaatgatgttcaagaaccatctatgcgg
cagattaatagaaaaagaaatagacctcttgagagtaggaaaatgttccatgatagtgat
aacaacagcaatattgagagagatgtctcttccagttttgagaagcggcggccaatcttc
acgccagccacaggacgtcctccagtaggaaaaggaagaggtagaggaagaggaaggagt
attgtatcctggagccaacaagattgcagatttaaccctatcgacacgcttgattttgca
tcacaggtagtttcacaagggctgcctacacaccctggcctttttgttggaacaggtata
ccaaatgctgcaactacacaaaatgcatcttggggtgcatatgggtttgttcctgggatg
agcaacagaattttggatccactccagccacttggtttgcaagggacccttcagtctacg
attgctccattattcaatatgggaatgcctcggcagcgttgcagagactttgacgagcag
ggattttgcttgagaggggatatgtgtccaatggagcatggtgtaaatcggattgttgtc
gaagatgtgcagagcctttcccagttcaatcttccagtctcagatccaaattcaaatgcc
ctgggaattcaatccggttcaggatcattgccttctattagggcatctccaggcttattc
accggcagcaaatttgtaccagcaaaagatgggaaacccatcttgtctgatgatgcatta
aaactgagtggagtttcatctgcgtctgttgttgctgaagctgatgtatatgatcctgat
cagcctttatggaacaacaagtgttcagaaacatctggcactgggttaatgcttccttta
ctgaacaatgatgaacctctgtggactttggattcttctcagcagagtcttgtgccatct
aatggctttcagaatgaacagggaagtagaccttttcgagaaaatataggtacacagaat
actaattcatctgtttggggccgaattcgccaaaataataggtcagaaatgggtataaag
actaataacaattcagtttctacaagtcatatttcagatgaaatgaaggaagataatgag
aaatctacagtgaaaacttcttccattccagaaaaacaaaatactgccgagatgaatcaa
aaagcaatagtgaggcagtccctccctagattatatgcagactctagtcgtcacaatggt
agaatgtcccaaaaagcttcacgtactctctatgtacatggtatacctgaaaagaacaac
acgaaggatgccctgttttcacatttccagaagtttggtgaggttgttgatatttatatt
ccactgaatagtgaaaaagcttttgtccaattttctacaagggaggaggctgaagctgcc
cttgaagcacctgatgcggtaatgggtaaccgttttataaaactatggtgggccaaccgt
gatagaattcatgatgctgggaaaagtagtcatcatagtaagttgccgctgtcatcttct
atgggggtgtccggtctttcatcttatttatctggaactgacaaagaagaaggaaatctg
aaatccacagttccaacgggaagcaaaacaccttctgaattgtcggtgaccgtcgcgggt
ccaaaaggtttatctgcaaatgctccaaaaatagcctctccgatgccaaaaaaattggat
ggcttggagcttttgaaagaggaacttcgaaaaaagcaggagattttggcccaaaagcgt
gatgaattccgccgccaattagacaaatttgagaaacaatctatttcagtcagaaggggt
gaagtagtctctgagcaggcagccagaaaacttaaagtggatatgggcaatgaaactgca
aaatctcgaacagccattgcaccaattactacagcaattactacagcaggcacactgcaa
gaagttgagaaaacaagaaaatctgaggtggttcttgtttcacctacttcaatagcaaat
tcaacaatcttgcaaaattgcaacacagaacagacaagtcatccctccatgccgaagtct
gatatgtgtagactggataatcagtctacttcattcaggattcttcctctgccagctgat
ctcgcagatgttgctattctgcaggatcatttttcatcatttggtgatcttgcctccata
gtactggaagagcacggagaaagaagtgataatgacggcatgaagacacctgaaaatttt
tgtgctcatataactttcacctcatgtgactccgcagagagagcttatgttggtggtcag
tgttggcaaggccatagtttgcactttatgtggctgagtgaatctgataactctaacaaa
gtctgtgacagccaagaaactttaggcccacctggatcttcaagtgctgacatccaagat
ggaccagtgaaatctgtgatgtcttcaccaactgaaggaacttcgttagacggtgtcatc
tgcaaggtaactgttgtggaagttgagtctaatagcggtgtggaggatgtacattgttat
cacagtgatatgctcaacacaacagcatcccgttctaatgtttcagttgctgaagataaa
atgagcattgatcttgcgaagtga
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