Musa acuminata (dessert banana): 135608329
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Entry
135608329 CDS
T03447
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.4-like isoform X1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
mus
Musa acuminata (dessert banana)
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mus04812
]
135608329
Cytoskeleton proteins [BR:
mus04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
135608329
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Katanin_con80
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_EML
Beta-prop_SCAP
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_IFT140_1st
eIF2A
WD40_RFWD3
Beta-prop_VPS8
Beta-prop_HPS5
Beta-prop_IP5PC_F
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_RIG_1st
VPS8_N
PROPPIN
Motif
Other DBs
NCBI-GeneID:
135608329
NCBI-ProteinID:
XP_064957141
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Position
BXJ2-3:complement(41305419..41318260)
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AA seq
778 aa
AA seq
DB search
MATTKRAYKLQEFVAHSSNVNCLKIGRRTSRVLVTGGEDHKVNLWAIGKPNAILSLSGHI
SAVESVSFDSSEVLVAAGAASGSIKLWDLEEAKIVRTLTGHRSNCIAVDFHPFGEFFASG
SLDTNLKIWDIRRKGCIHTYKGHTRGVNAIKFTPDGRWVVSGGEDNIVKLWDLTAGKLLH
DFKFHEGQIRCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRSMTFNPDG
RTLLCGLHESLKVFSWEPIKCHDAVDVGWSRLSDMNIHEGKLLGCSYNQSCVGVWVVDLS
RIEPYAIASAANLNGHSEPKSASSGSVSMQADNNIKSSMGRLSSSEPNAKETKPVAYVPG
TPQRIATSGGTKTTTTAPAPAPALAPVATTVKRSASKAQATTNLPTIKKSDIIPVIVPRT
SPRLELSADSTNDGIGRTIPCDIQSKSANFRKVSNINENSERADMSVQSGFVGSRTTEQN
ELMDQTAISSGNSVTQRVTGGETNLDDVKCVTTGRPGANLFRESSANYDHENHNIRIHKP
KEACSFDIPKGGRTRSLVATWERREHSPSYDQPRLSNSSETGATSSSPYSLRGRNRFAEK
ETVPASDEDAIAVLLGKHDQFLNLAQSRLIKLQVVCQLWERNDVKGVIDTIEKMSDHAVC
ADVLSSLKDKSEIITLDICASLLPLLTGLLESKIDRHLSVSLEMLLKLVKIFVPVIRSTL
SAGPSVGVDLQAEQRLERCNLCFIELEKIKNSISSLIRRGGSIGKAAQELNLALQEVL
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccaccaagcgagcgtacaagctacaggaatttgtagcacattcgtccaatgtc
aattgcctaaagattgggaggaggacttcgagggttcttgtcaccggaggagaggatcac
aaggtcaacctttgggctattgggaagcccaatgccatattgagtctgtctggccatatc
agtgcagttgaatcagtaagttttgattcgtcggaggttttggtggctgctggtgcggct
agtggctcaataaaattgtgggacttggaagaggcaaagatcgttcgcactctaactggg
cacaggtcaaattgtatagctgttgactttcacccatttggcgagttctttgcttctggg
tcactagatacaaatctaaagatctgggatatcagaagaaaaggatgcatccatacatac
aaaggtcatactcgaggggttaatgctattaagttcacccctgatgggcggtgggttgtt
tctggtggggaagacaacattgtgaagctttgggatcttactgctggaaaacttttacat
gatttcaagttccatgagggtcagattcggtgcattgattttcatcctcatgagtttcta
ctggcaacaggttcggctgatagaactgttaagttctgggatcttgaaactttcgagtta
atagggtctgctggacctgagacttctggtgtgcgttctatgacatttaatcctgatggg
agaactttgctttgtggattgcatgaaagtttgaaggttttttcttgggaaccaataaaa
tgccatgatgctgtggatgtgggatggtctagattatcagatatgaatatccatgaggga
aaacttcttgggtgttcttacaatcaaagctgtgttggcgtgtgggttgtggacctctct
cgcatcgagccatatgcaattgctagtgctgctaatctaaacggtcactcagaacctaag
tctgcatcaagtggtagtgtgtctatgcaagctgataataatataaagtctagtatgggg
aggctatcaagttcagagccaaatgctaaagagacaaaaccagtagcatatgtccctggt
actcctcaaaggattgcaacaagtggtggcacaaaaacaactactacagcaccagcccca
gcaccagcactggcacctgttgctactaccgtaaaaagaagtgcatcaaaagctcaggct
acaactaatcttccaaccataaaaaaatctgatataatacctgtcattgtccctagaact
agccccagattggagctgtccgctgattctactaatgatgggattggaagaacaatacca
tgtgatatccaatcaaaatctgctaattttcggaaagtatcaaacatcaacgaaaattca
gaaagggcagatatgtcagttcagtctgggtttgtgggcagtagaaccactgaacaaaat
gaactcatggaccaaacagctatttcttctggcaactctgtaactcagcgagtgactggt
ggagaaactaacctggatgatgttaaatgtgttacgacagggaggccaggagcaaatcta
ttcagagaatcaagtgcaaattatgatcatgaaaatcataacattagaatccataagcca
aaggaagcatgctcttttgatattccaaaaggaggaagaacaaggtcacttgttgcaacc
tgggaaaggagggaacattctccaagttatgatcagccaagattaagcaattcctctgag
accggcgctacttctagctctccatattctttgagaggtcgcaatcgatttgctgaaaag
gaaactgtacctgcttctgatgaggatgctattgctgttttactgggaaaacatgaccaa
ttcttaaacctggcacagtctcgattgatcaaattacaggtagtttgccaactttgggaa
agaaatgatgtcaagggtgtcattgatacaattgagaagatgtccgatcatgctgtctgt
gctgatgtattgagttctctgaaggataaaagtgaaatcattactctggatatatgtgca
tctctactgccacttctcactggccttcttgaaagtaagatagataggcatttaagtgtt
tccttggaaatgttgctgaagctagtcaaaatctttgttcctgtaatccgttcaacattg
tcggcaggtccatctgttggtgttgaccttcaagcagagcagaggctggaacgttgcaat
ttgtgcttcattgaactggagaagatcaagaatagtatttcttcccttataagaagagga
gggtccatcggaaaggctgcacaggaactgaatctcgctctccaggaagtgttatga
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