Musa acuminata (dessert banana): 135608845
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Entry
135608845 CDS
T03447
Name
(RefSeq) putative CCR4-associated factor 1 homolog 8
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135608845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mus03019
]
135608845
Messenger RNA biogenesis [BR:
mus03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
135608845
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
135608845
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
SGP
Motif
Other DBs
NCBI-GeneID:
135608845
NCBI-ProteinID:
XP_064957965
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All DBs
Position
BXJ2-4:45990628..45991755
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AA seq
375 aa
AA seq
DB search
MAHHPIIRRRVSENNLREELDRLVKFRRTFRYIAIDTEFTGVVNSAPSDASEEGLYSIVK
ESVDNMKLLQLGITLFDYNGNTPGLCWEFNFSDISPLPSNVSIDLLRRSGHDFERNVREG
ISGDMCGNLLRQNLFNGDDESVYVTFHGLYDFAYVIKLITGGAPMPDNLGQFIASVRKTF
GHFYDLKYIGEQLSSRTFGLMSLARELGVEAYGIHHQAAHDSVTIGRAFIEMERMCHVEG
DERFVSVLNGFSNSCMDRDGENANANYGHHRFQAPRAYYGHHGYQAPHAYYGHHRYQAPR
AIPPTMLALQPHAGLPFRVHDGCFPVLPFQAYGVPNLLPLHQAHGVPSSSESQHQQSTLS
CHINGLRFRDGVRES
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggcgcatcacccaatcatccgacgcagggtctcggagaataacctccgggaggagctc
gatcgtctcgtcaagtttcgtcgaacttttcgctacatcgccatagatacggagttcacg
ggcgtcgtcaattccgctccttccgatgcttccgaggaaggtctatatagcatcgtcaaa
gaaagcgtcgacaatatgaagctgttacagctcggaatcaccttgttcgactataacggc
aatactccgggcttgtgctgggagttcaacttctccgatatctcgcctcttccgtcgaat
gtctccatcgacttgttgcgccgaagcggccacgatttcgaacgaaacgtgcgagagggg
atcagtggcgacatgtgcggcaatcttctacgccaaaatctcttcaacggagacgacgag
tccgtttacgtcaccttccatggcctgtacgattttgcctacgtgatcaagctgattact
ggaggagcgccgatgcctgataacttgggacagtttatagcttcggtgaggaaaacgttt
ggccatttctacgatctcaagtacataggagagcaattaagcagcagaacttttggttta
atgagccttgcaagagaactaggagtagaagcatatgggatccatcatcaagcagcacac
gatagtgtaacgattggcagagcgttcatcgagatggagcggatgtgtcacgtcgaaggg
gacgaaaggttcgtctccgtcctcaatggcttcagtaacagttgcatggaccgcgacggg
gagaatgcgaatgctaactatggtcaccaccggttccaagctcctcgcgcttactatggt
caccacgggtaccaagcgcctcacgcttactatggtcaccaccggtaccaagctcctcgc
gctattcctccaacgatgcttgcattgcaacctcatgccggcctcccgtttcgagttcat
gatggttgtttcccggtgctgccatttcaagcttatggggtgcccaacttattgccgttg
catcaagctcatggggtcccgagttcatcggagtcccaacatcagcaaagcaccctttca
tgccacatcaatggattacgtttccgggatggggtacgtgaaagttag
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