Musa acuminata (dessert banana): 135609640
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Entry
135609640 CDS
T03447
Name
(RefSeq) uncharacterized protein LOC135609640
KO
K11790
denticleless
Organism
mus
Musa acuminata (dessert banana)
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mus04121
]
135609640
Ubiquitin system [BR:
mus04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
135609640
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Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WDR55
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML
EIF3I
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_DCAF4
MIOS_WD40
Beta-prop_HPS5
Beta-prop_DCAF12
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR11_1st
WD40_RFWD3
Beta-prop_WDR75_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
135609640
NCBI-ProteinID:
XP_064959168
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Position
BXJ2-4:complement(5096722..5100788)
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AA seq
515 aa
AA seq
DB search
MENRCLPSSFFGDLMSRELNGFRVRKRPYLGDLSSEPGGFGTGVLSVEHSGATTPPTAVS
FCKTSRNSHILAVTDEDGYVSFFDTRRSLPSYASCRERTAESRVCEWVAHSNAIFDICWI
KDDNQILTASGDQYVKIWNAEKRKCIGILAGHTGSVKTVCPHSSNPDIVVSGSRDGSFAL
WDLRCNSSSTNRFGEACLLSTAVVKEAHASAPRKRRRQGKAASMSITSVLYLKDEISIAT
AGAVDSVVKFWDTRNLKSSVTQACPHVEPFVRKETIQHGITWLSQDSHGASLVASCMDSR
IYLYEVLQPDKGPVKVFPGSKIESFFVKSAISPDGAHILGGSSDGNAYIWQVKRPESAPA
ILKGHDGEVTAVDWCSSEVGKLATSSDDFMVRVWNMKKGGRISARSPTAIRKRITAVVTE
CRKRILDDPPACSISMDDTFQALTGASVEPSSPDGSKMLEFSTPKSGKRSYNSFLREGKE
MQQSPEAALSSPSSVLNPPSSIKRRTIRDYFVSSS
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggagaaccgatgtcttccttcgtccttcttcggcgatctgatgagcagagagctcaat
ggcttcagagtacgcaaaaggccttatcttggtgatctctcgtcggagcccggtggcttt
ggcactggagtgctgtccgtcgagcacagtggcgccaccacgcctcccactgccgtctct
ttctgcaagacgagtaggaattctcacattcttgcggtgacggatgaggatgggtatgtc
agcttcttcgacacacgtcgcagccttccttcctatgcttcatgccgggagaggacggct
gaatctagggtttgtgagtgggttgctcacagcaatgcaatatttgacatatgctggata
aaggatgacaatcaaattctaacagcttctggcgatcaatatgtcaagatatggaatgct
gaaaagaggaaatgcattgggatcctggcagggcacacaggaagtgttaaaacagtttgc
cctcattcatcaaatcctgatattgttgtctctggttcaagagatggatcttttgctctt
tgggatctgagatgcaactctagttccacaaatcgctttggggaagcatgcttgttgtct
actgctgttgtcaaagaagcacacgcctctgccccgagaaaaaggaggcggcaaggaaaa
gctgcttctatgagcatcacatcagttctctatctcaaggatgagatctccattgccact
gctggagcagttgacagtgtggtgaagttctgggatacacgcaacctaaaatcatctgtt
actcaagcttgccctcatgtcgagccatttgtcagaaaggaaacaattcaacatggaatt
acatggctatctcaagattcacatggcgcctctctcgtagcttcttgcatggatagcagg
atctatttgtatgaggtgcttcaaccggacaaaggacccgtaaaggttttccctgggagt
aaaatcgagtcattttttgtgaagtctgcaatcagccctgatggagctcatattcttggg
ggttctagtgatggtaatgcctacatatggcaggtgaagagacctgaaagtgcaccggcc
attttgaagggccatgacggagaagtcactgcagtcgattggtgctcatcagaagtggga
aagttagcaacttcttcagatgacttcatggtacgtgtctggaacatgaagaagggtggt
cgcataagtgcaagatcgccaacagcaattagaaaaaggataactgctgttgttaccgag
tgcagaaaacgaatcttggatgatcctccagcatgttcgatttccatggatgacactttc
caagctttgacaggagcatcagtggaaccatcctctcctgatggaagcaaaatgcttgag
ttcagtacgcccaagtctggaaagagaagttataactcatttcttagggaagggaaggag
atgcagcaaagcccagaagctgctttgagtagcccatcttctgtcctcaaccctccttcc
tctattaaaaggagaactattcgtgactactttgtttcttcttcctaa
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