Musa acuminata (dessert banana): 135610014
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Entry
135610014 CDS
T03447
Name
(RefSeq) replication factor C subunit 1-like isoform X1
KO
K10754
replication factor C subunit 1
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03030
DNA replication
mus03410
Base excision repair
mus03420
Nucleotide excision repair
mus03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
135610014
03410 Base excision repair
135610014
03420 Nucleotide excision repair
135610014
03430 Mismatch repair
135610014
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mus03032
]
135610014
03400 DNA repair and recombination proteins [BR:
mus03400
]
135610014
DNA replication proteins [BR:
mus03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
135610014
DNA repair and recombination proteins [BR:
mus03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
135610014
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
RCF1-5-like_lid
AAA_22
PTCB-BRCT
AAA_30
Rad17
Gp44_lid
AAA_5
AAA_assoc_2
Sigma54_activ_2
AAA_19
BRCT_2
Zeta_toxin
nSTAND3
DNAX_ATPase_lid
AAA_16
RuvB_N
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
135610014
NCBI-ProteinID:
XP_064959981
LinkDB
All DBs
Position
BXJ2-4:11165050..11180010
Genome browser
AA seq
981 aa
AA seq
DB search
MSSDIRKWFMKQHDKGSGSVSKPATAVPDKPSPLSSQKPSQVQATQENSGRRKTSKYFTT
STAKEVNSEETVKEKVEAKIPPKRKTRKSIEDLPDDIKPSPAKKLHRNDDDDDDFVPPSK
DKRSAEIKPTKKMKTGSGIQIISSSHEVDDHLEDETDEKDSETPLKAGGRGKGGRGSGAT
AGGRGRGGGRGGYMNFGERKDPPRKGEKEVPEGSPECLNSLTFVISGTLDSLEREEAEDL
IKRHGGRVTSAVSKKTSFLLADEDVGGRKSSKAKELGIPFLTEDGLFDKIRKSKPAKAQM
QEEKKKRSSEKMDKPIINKSPCKVEVKDDKAVSIGRKDAAKNVKSGISPDKRKSQSGDRS
SLTWTEKYRPKLPNDIIGNQSIVKQLHDWLMTWDEHFLHAGQKGKGKKQSDSGSKKAVLL
SGSPGIGKSTSAKLVSQMIGFQAIEVNASDSRGKADAKIGKGIGGSTSNSIKELVSNEIV
NSSSDCRSKRQKSVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSL
VNYCLPLNYRKPTKQQMAKRLKQIADAEGLQINEVALEELAERVNGDMRMAINQLQYMSI
SKSAINYDDIRQRLLSSAKDEDISPFTAVDKLFGFNGGKLRMDERIDLSMSDPDLVPLIV
QENYINYRPTSIGKDENGVKRMQFLAQAAESIGDGDIFNVQIRRYRQWQLSQSSSFASCI
IPAALMHGHRETLEPGERNFNRFGGWLGKNSTMGKNLRLLEDVHVHFLASQEAKLDRATL
RVDYFTLLLKQLTDPLQMMPKEVAVQKVVEFMDAYSLTQEDFDTIVELSKFKGHPNPMDN
IQPAVKSALTKAYKQGSSSRVVRSADLITLPGLKKAPKKRIAAILEPVEDGVSEENGEAL
AENEEENSDSEDADDLGLRTNADQKPQLDLLSNKPKGVQVQLDLKNNGKSNVKKKTPASK
SRASEPADKGAQMSGSRKRKK
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccgatataaggaaatggttcatgaagcaacacgacaaggggagtgggtctgta
tcaaagcctgctacagctgttccggataaaccttctccgctgagttcacagaaaccgagt
caggtgcaagcaacacaagagaactctggcagaagaaaaactagcaaatatttcacaaca
tctacagccaaggaagtgaactcagaggaaacggtaaaggaaaaagtagaagctaaaata
ccaccaaaaaggaagactcgaaaatccattgaggatctcccagatgatattaagccgtca
cctgcaaagaagttgcataggaatgatgatgatgatgatgactttgtgccacctagtaag
gataaaaggtcagctgagatcaaacctaccaagaaaatgaagactggctctggtatacag
attatcagtagttctcatgaagttgatgatcatcttgaagatgaaaccgatgaaaaagat
tctgaaactcctcttaaagctggtgggaggggtaagggtggaagagggtctggagctact
gcaggaggaagagggagaggtggtggcagaggtgggtatatgaattttggagagaggaag
gatcctccacgcaaaggggaaaaggaagttccggaaggttctcctgaatgtttaaatagt
ctgacattcgtcataagtggtacacttgacagtttggaacgtgaggaagctgaagattta
attaaacgccatggtggtagggtcactagtgctgtcagcaaaaagacgagttttctttta
gctgatgaggatgttggtgggaggaaatcttcaaaagccaaggagctgggtattcccttc
cttactgaggatggattatttgataagatccggaaatcaaagcctgctaaagcacagatg
caagaagagaaaaagaagagatcctcagaaaagatggacaaaccaattatcaataaaagc
ccttgcaaagttgaagtgaaagatgataaagctgtttctattggaagaaaagatgctgca
aaaaatgttaaatcaggcatctcgcctgacaaaagaaaaagtcagtctggtgatcggagt
tcattgacatggactgagaagtatcgtccgaagcttccaaatgacatcattggcaatcag
tcaatcgttaagcaacttcatgactggttaatgacctgggatgaacatttcttgcatgct
ggccagaaaggaaaagggaaaaagcaatctgacagtggatctaaaaaagccgtgctgctg
agtggatcacctggaattgggaaaagcacttcagcaaagttagtcagtcagatgattggt
ttccaagctattgaggttaatgcaagtgatagccgtggcaaggcagatgccaaaattggt
aaaggaattggtggaagtacatcaaattctatcaaagaacttgttagcaatgaaatagta
aattctagcagtgactgcaggtcaaagcgtcaaaaatctgtgttaatcatggatgaggtt
gatggcatgtctgctggagatagaggtggagtggctgatcttattgctagcataaagatt
tctaagattcctatcatctgcatctgtaatgatcgctacagtcaaaagctcaagagtctt
gtcaactactgcttgccacttaactacaggaaacctactaagcagcagatggctaaaagg
ttgaagcaaattgcagatgctgaaggtctccaaattaatgaggttgcacttgaagaactt
gcagaaagagtaaatggagatatgcgcatggcaataaatcaattgcagtacatgagcatc
tcaaagtcagcaatcaattatgacgatataagacagcgccttctttctagtgcaaaggat
gaagatatttcaccctttacagccgttgacaagctctttggattcaatggtgggaagctg
cgtatggatgaaagaattgatttaagcatgagtgatcctgacttggttccccttattgtt
caggaaaattatatcaactatcgaccaacttctattggcaaggatgagaatggagttaaa
agaatgcaattccttgcacaggctgctgagtctataggggatggtgatatattcaatgtt
cagatcagaagatatcggcagtggcagctttcgcaatctagttcatttgcatcctgtata
atcccggctgctttgatgcatgggcatcgagagacccttgaaccgggagaacgcaacttt
aataggtttggcggatggctagggaagaactcgacaatgggaaagaatttgcgacttttg
gaagatgttcatgttcactttcttgcatcacaggaagctaagttggatagggcaaccttg
cgggtggactactttactcttctattgaaacagcttacagatcctcttcaaatgatgcct
aaggaagttgctgttcagaaggttgtggaattcatggatgcgtattctttaactcaagaa
gacttcgacacaattgtggagctatccaagttcaagggacatccgaatcccatggacaac
attcagccagcagtgaaatctgcactaaccaaggcatataagcaaggaagcagctcccgt
gttgtgcgatcagcagatctgataactcttccgggcttgaaaaaggctccgaagaagcgt
atagcggcaatcttggaacctgtggaggatggtgtatctgaagaaaatggagaagctcta
gcggaaaatgaagaagagaattctgattcagaagatgcagatgatcttggacttcgtaca
aatgccgatcagaagccacaacttgatcttctgagcaacaaaccgaagggagtccaagtg
cagcttgatttgaagaacaatggaaagtcaaatgtgaagaagaagacccctgctagcaaa
tcaagagcttcggagcctgctgacaagggggcacaaatgtctggaagtagaaagaggaaa
aaatag
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