KEGG   Musa acuminata (dessert banana): 135610062
Entry
135610062         CDS       T03447                                 
Name
(RefSeq) splicing factor SF3a60 homolog
  KO
K12827  splicing factor 3A subunit 3
Organism
mus  Musa acuminata (dessert banana)
Pathway
mus03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mus00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    135610062
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mus03041]
    135610062
Spliceosome [BR:mus03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    135610062
 Complex B
    135610062
 Complex C
   U2 SnRNP specific factors
    135610062
SSDB
Motif
Pfam: SF3a60_Prp9_C SDE2_2C SF3A3 SF3a60_bindingd Desulfoferrod_N LLPH SAP
Other DBs
NCBI-GeneID: 135610062
NCBI-ProteinID: XP_064960107
LinkDB
Position
BXJ2-4:12250004..12261331
AA seq 507 aa
MSSTLLEVTRSAHEDVERLERLIVRELQREPANNRDRLFQSHRVRHMIDVITSTTEKLID
IYEDKDNARRDEIAALGGQTASGTTNLFSAFYDRLKEIRDYHRRHPAARVVDATEDNEEL
LKEEPHIEFSGEEGFGRYLDMHELYNEYINSKFGETMEYTAFLDSFSQTQKVPCNLKLSR
QYREYLEHVLEYLISFVERTQPLQDLDRLFAKVGTEFEQLWADGTVLGWENKGSEDGLIQ
SQEAVIDLDYYSSVEELMEVGPEKLKEALAARGLKTGGTLQQRAERLFLTKYTPLDQLDR
KHFTKGSRNTQQNGAAEQMSSKKEIALMEAKLQRICELLKEVIEQTKENVEKKQALTYEE
MEAEREEEVIQADTESDDEEQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGNQ
SYWGRRAFERHFKEWRHQHGMRCLNIPNTKNFNEITSIQEAKELWEKIQERQGLSKWRPD
LEEEYEDREGNIYNKKTFSDLQRQGLI
NT seq 1524 nt   +upstreamnt  +downstreamnt
atgtcttcgaccctcctggaggtgacgcgctccgcccacgaggacgtggagcggctcgag
cggctcatcgtgcgggagctccagcgcgaaccggccaacaaccgggaccgcctcttccag
agccaccgcgtccgccacatgatcgatgtcatcaccagcaccaccgagaagctcattgat
atatacgaggacaaggacaatgcgaggagagatgagattgcggcgctcggagggcagacc
gcaagtggcacaaccaatctcttcagtgcgttttatgatcgtcttaaggagattcgtgat
taccacagaagacatccagctgctcgcgtggttgatgctaccgaggataatgaagagtta
ctaaaggaagaaccacatattgagttcagtggcgaggaaggttttggtcgatacctagac
atgcatgaattatacaatgagtacatcaattcaaaatttggtgagaccatggagtacact
gcatttttggattcattttcacaaacgcaaaaagttccttgcaatctaaagttgagcagg
cagtacagagaatatttggagcatgttctggaatatttaatatcatttgtggagcgtact
cagccgcttcaagatctggataggctattcgccaaggtgggaactgagtttgaacaactg
tgggctgatggaacggttttgggatgggaaaataagggttcagaagatggtcttattcag
tctcaggaagctgtgattgatcttgattattacagttctgttgaagaacttatggaagtt
ggacctgaaaaattgaaagaggccttggctgctcggggattgaaaactggtggtacactt
cagcagcgtgcagagcggctatttttgacaaagtacacacctttagaccaactggacaga
aaacatttcaccaaaggctcacgaaacacacaacaaaatggtgctgcagagcagatgagt
tccaagaaagaaattgctttaatggaggcaaagttgcaacgaatatgtgagttactaaaa
gaggttattgaacaaacaaaagaaaatgttgaaaagaaacaagctttaacatatgaggaa
atggaagcagaacgggaagaggaggttatacaagctgatacagaaagtgacgatgaagag
cagcagatctacaatcctctcaagttacctatgggttgggatgggaagcctattccctac
tggctttataagcttcatggacttggtcaggaattcaaatgcgagatatgtgggaaccaa
agttactggggacgaagggcattcgaacgccatttcaaggagtggcgtcaccagcacgga
atgcgatgtctcaatattcccaacaccaagaacttcaatgagatcacatccatccaggaa
gccaaagaactttgggagaaaatccaagaacgacaaggattgagtaagtggaggccagac
cttgaagaagagtatgaagacagggaagggaacatctacaataaaaaaaccttctcggat
ctgcagcggcagggcctgatttaa

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