Musa acuminata (dessert banana): 135610127
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Entry
135610127 CDS
T03447
Name
(RefSeq) transportin-1-like isoform X1
KO
K18752
transportin-1
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
135610127
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mus03019
]
135610127
03009 Ribosome biogenesis [BR:
mus03009
]
135610127
Messenger RNA biogenesis [BR:
mus03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
135610127
Ribosome biogenesis [BR:
mus03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
135610127
Pre-60S particles
135610127
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
TPR_IPO5
HEAT_GCN1
TPR_IMB1
IBN_N
HEAT_2
TPR_DNAAF5
TOR1L1_N
CEP104-like_TOG
HEAT_MROH2B_C
PDS5
INTS7_N
Ltn1_1st
Motif
Other DBs
NCBI-GeneID:
135610127
NCBI-ProteinID:
XP_064960286
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Position
BXJ2-4:complement(23117906..23142244)
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AA seq
889 aa
AA seq
DB search
MAAAALWQPREEGLREICGLLEQQISPNGDQARIWQQLQQYNRLADFNNYLVFILAHAVG
KSLEVRQAAGLLLKNNLRTTFSSLSSSYRQYIKSELLPCLGASDRTVRSTVGTVVSVLLQ
LETVAGWPELLEALAQCLASNDFNHMEGAMDAIYKICEDIPEELDVDVPGLSERPINIFV
PRLLQFFQSPHAILRKLSLSSINQFIVFMPTALFMSMDQYLQGLFHLAQDPSAEVRKLVC
SAFVQLIEVRPTFLEPHLRNVIEYLLQANKDPDDEVALEACEFWSAYCDGNLPPDGLREY
LPCLIPILLSNMAYAEDDETLFDAEDDESFPDRDQDLKPRFHSSRFHGSDNSEEDDEDTV
NVWNLRKCSAAGLDILSNVFGDEILPTLMPLIQQKSSTTSDSSWKEREAAVLAIGAVAEG
CINGLYPHIPEIVTFLIPLLDDKFPLIRSITCWTLSRFSKFIIQNIGHRDGYEQFDKVLM
GVLRRILDSNKRVQEAACSAFATLEEEAAEELAPRLEIILQHLLCAFGKYQRRNLRILYD
AIGTLADAVGSELNQPKYLDILMPPLIAKWQQLANTDKDLFPLLECFTSIAQALGPAFSQ
FAEPVFQRCISLIEIQQLAKVDHVTAGVQYDKEFIVCSLDLLSGLAEGLGSGIETLVAKS
NLRDLLLQCCMDQATDIRQSALALLGDLAKVCPVHLHPRIPDFLRVAAEQLNITAVKEAV
SVANNACWAIGELAVQVRQEIAPVVLTVISYLVPILQNAEGLNKSLRENSAITLGRLGWI
CPELVAPHVGHFIQPWCTALCMIRDDYEKEDAFRGLCAIVRTNPQGAVNSLSYLCKAVAS
WHEIQSEDLHNDICQVLNGYKQMLPNGAWEQCMSTLEPPVVQRLSRFQV
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggcgctgtggcaaccgcgggaggaggggctccgcgagatctgcggcctc
ctggaacagcaaatctcccccaacggtgatcaggcccggatttggcagcagctccagcag
tacaaccgacttgccgatttcaataactacctcgtcttcatcctcgcccatgccgtgggt
aaatcattggaagtacgacaagctgctggtttgctgttgaagaacaatcttaggacaact
ttcagttccttgtcttcttcataccggcaatatataaagtctgagctgttgccatgttta
ggggcatcagataggacagttcgctctacagttggtacagttgtcagtgttcttcttcag
ttagagacagttgctggatggccggagttgttagaagctcttgctcaatgcttggccagt
aatgattttaatcatatggaaggtgccatggatgctatatacaagatttgcgaggacatc
ccagaagagcttgatgtggatgttcctggattatctgaacgccccatcaatatttttgtg
ccaagattgctgcagtttttccagtctccacatgcgatattgaggaagttgtcattgagt
tctatcaatcaatttattgtatttatgcctacagccttgtttatgtccatggaccaatac
cttcagggtctatttcatcttgctcaggacccttctgcagaagtgcggaaattggtttgt
tctgcctttgttcaactgatagaagttcgaccaaccttcttggagccccatttgagaaat
gtaattgaatacctcttgcaagccaataaggaccctgatgacgaagttgctctcgaggca
tgtgaattttggtcagcatattgtgatggtaatttgccacctgatggtttacgagagtat
ttgccatgcttaattccgattttattatcaaatatggcttatgctgaggatgatgagaca
ctttttgatgccgaggatgatgagtcatttccagatagggatcaggatctgaagcctcgt
ttccattcatcacgttttcacggatctgataactctgaagaagatgatgaggacactgtc
aatgtttggaatttgcgcaaatgcagtgcagctggactagatatcctttcaaatgttttt
ggagatgagattcttccaactttgatgcctttgattcagcaaaaatcatcaactacaagt
gactctagttggaaggagagggaagctgctgttttggctattggggccgtagcagaggga
tgcattaatggattatacccccatattcctgagattgtgacattcctcattccacttttg
gatgataaatttccacttatacggagtatcacttgttggacactttctcgttttagcaag
ttcatcattcagaatattggtcacagagatggttatgaacaatttgacaaagttctaatg
ggagttctgagaagaatattggattccaacaagcgagtgcaagaggctgcatgttctgct
tttgcaacacttgaagaggaggctgcagaggaattggccccacgtctggaaatcattttg
cagcatttgttatgtgcttttgggaaatatcagaggcggaaccttcgaattctttatgat
gctatcggtactctagcagatgcagtcggttcagaactcaatcagccaaaataccttgac
atattgatgcctccattaatcgctaagtggcaacaacttgcaaacactgacaaagatctc
tttccattgcttgagtgctttacatccattgcacaggctttaggaccagcattttctcaa
tttgctgaacctgtattccaaaggtgcattagtcttattgagattcagcaattggccaag
gttgatcatgtgactgctggcgtccaatatgataaggaattcattgtctgctcattggat
ctgttatcaggccttgcagaaggtctgggcagtgggatagagaccctggttgcaaaatcc
aacttgagagacctgcttctgcaatgctgcatggatcaggcaactgatattcggcagagt
gcccttgcacttcttggtgaccttgcaaaagtttgtcctgtgcacctgcaccctcgtatt
ccagatttcctaagggttgcagctgaacaactgaatattactgcagttaaggaagctgtg
tcggtagcaaacaatgcttgttgggccattggagaattggctgtccaggttcgtcaagaa
attgctccagtggttttgacagtaatatcatatttggtccctattctccaaaatgcagag
ggtttgaacaagtcattgcgagaaaatagcgctatcacccttgggaggcttggctggatt
tgtccagaacttgtggcaccacatgtgggacactttatacagccatggtgcactgcttta
tgcatgatacgagatgattatgaaaaggaagatgcatttcgcgggctttgtgcaattgta
agaacaaatcctcaaggtgctgtgaattcactttcatacttgtgtaaagctgttgctagt
tggcatgaaatacagagtgaggacctacacaatgacatttgccaagttctgaacggatat
aaacagatgcttccgaatggagcatgggaacagtgcatgtcaactttagaacctccagtg
gtgcagagattgtcaagatttcaagtgtaa
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