Musa acuminata (dessert banana): 135610244
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Entry
135610244 CDS
T03447
Name
(RefSeq) ABC transporter B family member 28-like isoform X1
KO
K05657
ATP-binding cassette, subfamily B (MDR/TAP), member 10
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
135610244
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mus02000
]
135610244
Transporters [BR:
mus02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
135610244
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
AAA_22
AAA_16
ABC_ATPase
RsgA_GTPase
AAA_30
AAA_5
AAA_29
Zeta_toxin
AAA_23
AAA_25
AAA_15
AAA_28
Rad17
AAA_14
AAA_33
Motif
Other DBs
NCBI-GeneID:
135610244
NCBI-ProteinID:
XP_064960582
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Position
BXJ2-4:complement(30215686..30226954)
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AA seq
715 aa
AA seq
DB search
MAAASTSLLQSLFSPFPFPSRMLTSSSISGRCPAALLVRRPHRTARNPPSHVTGVRRRRS
GGHARAAYVSAPAADPDPVAKDESPAADVLSLPPVAISWSVIWSLLSRHKIRMAVSLASL
VGCTSCTLAMPIFSGKFFQTLTGTVSEPLWRLLSQIAFLYSLEPIFTIIFVTNMTIIWES
VMANLRGQIFRQILIQKVEFFDRHKVGELTGLLTSDLGSLKDIVNENISRDRGLRALSEV
VGTICILFTLSTQLAPILALLMVVISVLVAVFKRSTVPVFISHGMVQASISDCATETFSA
IRTVRSFAGEKRQFSIFRNLVLAYQNNGIKLGTLKSANESLTRTVVYISLMALYCLGGSK
VKAGELSVGTMVSFIGYTFTLTFAVQGGVNTLGDLRRTFAAAERINSILSLAEIDMSLAY
GLEKELQTTEVDINLGLNHEDVYHKKKQSKHYMLELRSASDGCNLAWSGDICLEDIYFSY
PLRSDVEVLSGLNLTLECGKITALVGPSGAGKSTIVQLLARFYEPTRGRITVAGEDIRTF
DRREWARVVSLVNQEPVLFSVSIGENIAYGLPDETVSKDDIIKAAKAANAHEFIISLPQG
YDTLVGERGSLLSGGQRQRIAIARALLKNAPILILDEATSALDATSESLVQQALDHLMKG
RTSLVIAHRLSTVQNANQIALCSGGRIAELGTHLELLAKKGQYASLVGTQRLAFE
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgcctccacctctcttcttcaatccctcttctctcccttcccattccctagt
cggatgctcacctcctcctccatctccggccgatgccccgccgcgctcctcgtccgtcgc
ccgcatcggacggctcgaaaccctccctcgcacgtcaccggcgtgcggaggaggaggagc
ggaggccatgctcgtgccgcctatgtctccgcccctgcagccgaccccgatcccgtcgcc
aaggatgaaagtcccgcggcggacgtcttgtccctgccgcctgttgccattagctggagc
gtcatctggtctctcctctcccgtcacaagattcggatggccgtctcgctcgcctctcta
gttggatgcacttcttgtaccctcgcgatgcctatcttctctgggaagttctttcagaca
cttacagggacagtttctgagcctttatggagacttctatctcagattgcctttttgtat
tctttggaacccatctttactataatcttcgtcaccaacatgaccattatatgggagtct
gtgatggcaaatctaagaggccagatatttagacagatattgattcaaaaggtggagttt
tttgaccgtcataaggttggtgaattgactgggttgttgacatctgacttgggttcttta
aaggatattgtcaatgagaatatttcaagagatcgtgggctgagagcactctctgaggtt
gttggtacgatatgcatacttttcacactctcgacacagttggctcctatcttagcgttg
ctgatggtggttatatctgttttagtagctgtgtttaagcggtcaactgttcctgtcttc
atatctcatggaatggtgcaagcgagcatatcagactgtgcaactgaaacattttctgca
attcgtactgttagatcttttgctggtgagaagcgacagttctccatcttcagaaatttg
gtacttgcttaccagaacaatggcataaaacttggtactttgaagtctgcaaatgagtcc
ttgacaaggacagtagtctacatttctctgatggcactttattgtcttggtggaagcaaa
gtcaaggcgggtgaactgtctgttggaactatggtttcttttattggttacactttcacg
ctaacttttgcggttcaagggggtgtcaacactctcggtgatctccgccggacttttgct
gctgctgaaagaattaattctattctttctctagcggaaattgacatgtcacttgcatat
ggtttagagaaagaactccaaacaactgaagtagatatcaatcttggtttgaatcatgaa
gacgtttatcataagaagaaacaaagcaagcattacatgttagaactgagatcagcaagt
gatgggtgtaatctagcttggtcaggtgacatctgtctagaagatatatacttctcttat
cctttaaggtctgatgtggaggtcttgagtggtctgaatctgaccctcgaatgtggaaag
ataacagcactagtgggacccagtggtgctggaaaaagtacgatagtacaacttctggca
cgcttttatgagccaacgaggggtcggatcactgtagcaggagaagatatcagaactttt
gataggagggaatgggcccgggttgtgtctctagtgaatcaggaaccagttctattttca
gtatcaattggagaaaatattgcatatgggcttcctgatgagactgtctccaaggatgat
ataattaaggcagctaaagctgccaatgctcatgaattcataatctcacttcctcagggt
tatgacacactagttggtgaacgtggaagcctattaagtggtggacagagacagaggatt
gctatagcacgagctcttcttaagaatgctccaattttaatacttgatgaggccaccagt
gctctggatgcaactagtgagtccctagtgcagcaggctctcgatcacttgatgaaagga
aggacatccttggtgattgcccatagattaagtactgtacaaaatgcaaatcaaattgct
ctttgctcaggcggtaggatagcagaactaggaacccaccttgagttgttggcaaagaaa
ggtcaatacgcctcattggttggaacacagcgccttgcgtttgaatga
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