Musa acuminata (dessert banana): 135610541
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Entry
135610541 CDS
T03447
Name
(RefSeq) pre-mRNA-processing protein 40A-like isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135610541
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mus03041
]
135610541
Spliceosome [BR:
mus03041
]
Complex A
U1 snRNP components
U1 related factors
135610541
Complex B
135610541
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
Motif
Other DBs
NCBI-GeneID:
135610541
NCBI-ProteinID:
XP_064961262
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All DBs
Position
BXJ2-4:35529632..35558125
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AA seq
1034 aa
AA seq
DB search
MASNPQSSGTQPFRPAVVGPAGPPQNFVPPMPMQFRTLVPPTHQFVPAACQPFRPVAQGM
PGPNVAMPTGQTQMPHFPQSQHLPPISGQPGQVLPSSQAIPLPYVQASRPIISGSLPPQQ
NAQVTSNVPNFPSLGMPLSSSYTFMTSYGQAPNSINAPSQFQPASMMQTPAPLVAQPWSM
PGTQSMPLVTPLIQTAQLPAAAAVMAPAQTVQPSSTEQMSSDWQEHTSADGKRYYYNKKT
RQSVWEKPLELMTPTERADASTDWKEFTAADGRKYYYNKVTKQSKWTMPDELKLAREQAE
KSATQPAPKETGTTVVSVASSVPSVETPSASALALNGPAAVSNAMQLPVDSGTQPPATSV
APSSIAVVTSAGINSSSSVGTENTVGVSNHHAPLTPVITPASASSEFPSLSVDAPTAAIN
SNQDSSSLTDSASVPDEISAQDLEEAKRTIPVVEKTNFTQLEDKMVDEGQFVYANKLEAK
NAFRALLESANVESDWTWEQAMRVIINDKRYGALKTLGERKQAFNEYLGQRKKQEAEERR
IKQKKAKEDFTRMLEECKELSSMTRWSKAITMFEDDERFTAVERSREREDLFEGYIAELQ
KKERAKAAEAHKRNIMEYRAFLESCDFVKANSQWRKVQDRLESDERCSRLEKIVRLENFQ
EYVRDLEREEEEQRKMQKEQLRRVERKNRDEFRKLMEEHVAAGVLTAKTHWRDYFTQVKD
LSPYLAISSNTSGATPKDLFEDVTEELEKQYHEDKAQIKDAMKIGKITLASSWTFEDLKT
AVAGIDSLRGISEINLKLVFDELLERVREKEDKDAKKRQRLADNFSDLLYSIKEITAFSN
WEQCRSLFEDSQEYRSIGDDNFGREVFDGYVAHLQEKLKEKERKREDEKAKKEKEREEKE
KRKEKEKKEKEREREKEKGKDRARKDEIESDIIDVMDSHSSKDKKRDKDKERKHRKHHHT
KADDISSDKDQKEESKKSRRHSSDRKKSRKHAYASDSDTENRHKRHKKDRDGSRSNDGYE
ELEDGELGEDGEIR
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atggccagcaatccacagtcctctgggacacagccttttaggcctgcagtagtggggcct
gctggcccacctcaaaattttgtcccccctatgcctatgcagtttcgaacattggttcca
ccaacgcatcagtttgtcccagcagcctgtcagccattccggcctgttgcacaaggaatg
cctggaccaaatgttgccatgcctactggtcaaacacaaatgccccattttcctcaatca
cagcatttgcctccaatatcaggccaaccaggtcaagtgctgccatcatcacaagcaatt
ccattgccgtatgttcaagcaagtagacctattatatctgggtcattgccacctcaacag
aatgctcaggtgacaagcaatgtgcctaattttcccagtttaggaatgcctctttcttca
tcttatacgttcatgacatcttatggtcaggcaccaaatagtataaatgctccatcccag
tttcaaccagcatcaatgatgcagactcctgcccctttagtagcacaaccctggtctatg
cctggaactcaaagcatgcctcttgttacccctttgatccaaactgcacagctacctgca
gctgctgctgtgatggctccagcacaaactgtccagcctagctctactgaacagatgtct
tctgattggcaagaacacacatctgcagatggtaaaaggtattattataataagaagacc
aggcaatctgtctgggagaagccacttgagttaatgacacctactgagagggcagatgca
tcaactgactggaaggaattcactgctgcagatggtcgaaaatactactataacaaagtc
acaaagcaatccaaatggacaatgcctgacgagctcaagctagctcgagaacaagcagag
aagtctgcaactcagccagcaccaaaagaaacagggaccactgttgtatcagttgcttca
agtgttccttctgttgagacaccttctgcaagtgctttggctcttaatggaccagcagca
gtatctaacgccatgcagttgccagttgattctggtacccaacccccggcgacctctgtg
gcaccatcatccattgctgttgtaacatctgctggcatcaattctagttcttctgtagga
acagaaaacacagttggtgtgtcaaatcatcatgcacctttaactccagtaatcactcct
gcttctgcgagtagtgaatttccttctctttctgtggatgctccaaccgctgcaattaac
agtaatcaagacagttcatcccttacagattctgcaagtgtgcctgatgaaatttctgct
caggatcttgaggaagctaaaaggaccattccggttgttgagaaaactaatttcactcaa
ttagaagataaaatggttgatgaaggacagttcgtttatgctaacaagctggaggcaaaa
aatgctttcagggctttactggaatctgctaatgtggagtctgattggacttgggaacag
gcaatgagggttatcatcaatgataaaagatatggtgctttgaaaacacttggagaaagg
aaacaagcatttaatgagtacctgggccaaaggaaaaaacaggaggctgaggagaggcgc
atcaagcagaagaaagcaaaagaagacttcactagaatgctagaagaatgcaaggaactt
tcatcaatgactagatggagtaaagcgataaccatgtttgaagatgatgaacgatttact
gcagtcgagcggtcaagagagcgtgaggatcttttcgagggctatatagcggagctccag
aagaaggagagagcaaaggctgctgaggcgcataaaagaaacattatggaatatagagct
tttcttgaatcttgtgacttcgtcaaggcaaacagtcaatggagaaaagtccaagatcgt
ctggagagtgacgaaagatgttctcgacttgaaaagattgttcgattggagaattttcag
gaatatgttcgtgatctggagagagaggaggaggaacagaggaagatgcaaaaggaacag
ttacgacgtgtagagcgcaaaaaccgtgatgagtttcgtaagttgatggaagaacatgtt
gctgctggagttcttacagctaaaactcactggcgtgattatttcacacaggtcaaagat
ttgtctccttacttggcaatatcatcaaatacatcaggtgcaacacccaaagatctgttt
gaagatgttactgaggaacttgagaagcagtatcacgaggacaaggctcaaattaaagat
gcaatgaagatcggaaaaattacattggcttcatcatggacatttgaggacttaaagact
gctgttgcaggtattgatagtttgagaggaatatctgagataaacttgaagctggtattt
gatgagttactggaaagagttcgggaaaaggaggataaagatgctaaaaagcgccaacgt
cttgcagataatttctctgatctgttatactcgatcaaggaaataactgcattttcaaat
tgggagcaatgcagatcactttttgaagacagtcaggaatataggtcaattggtgacgac
aattttggaagagaggtttttgacgggtatgttgctcacttgcaagaaaaattgaaagag
aaagaacgcaagagggaagacgaaaaggcaaaaaaagagaaggaaagagaagagaaagaa
aaaaggaaggagaaagagaaaaaggaaaaagagagagaacgtgaaaaagaaaaaggaaag
gatcgggctagaaaggatgaaatagagagtgatatcattgatgtgatggatagccatagt
tcgaaggataagaaacgggacaaagacaaagaaaggaaacaccgtaaacatcatcacacc
aaagcagatgatataagctctgacaaggatcagaaagaggagtctaagaagtccaggaga
catagtagtgaccgaaagaaatcccgaaagcatgcttatgcttctgattctgatactgaa
aatcggcacaagaggcataagaaggatagagatggatctcggagtaatgatggttatgaa
gaacttgaagatggagaacttggcgaagatggggaaatccgttag
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