Musa acuminata (dessert banana): 135610786
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Entry
135610786 CDS
T03447
Name
(RefSeq) ubiquitin receptor RAD23b-like
KO
K10839
UV excision repair protein RAD23
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03420
Nucleotide excision repair
mus04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
135610786
09124 Replication and repair
03420 Nucleotide excision repair
135610786
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
mus03051
]
135610786
03400 DNA repair and recombination proteins [BR:
mus03400
]
135610786
Proteasome [BR:
mus03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
135610786
DNA repair and recombination proteins [BR:
mus03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
135610786
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
TECR_N
UBA_3
Dsc3_N
HEPN_Toprim_N
SPATA3
Motif
Other DBs
NCBI-GeneID:
135610786
NCBI-ProteinID:
XP_064961783
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Position
BXJ2-4:complement(38906747..38918423)
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AA seq
389 aa
AA seq
DB search
MKLTVKTLKGTHFVIRVQPNDTIIAVKKNIEQEQGKDSYPWGQQLLIHNGKVLKDETTLE
ENKVNEDGFLVVMLSKSKAAGSSGSSSAQPPTTSAVQHPAPKEPPAQVPVQVPAQVSAQA
PSQVPAQVPPRISAEAPSQILASADAYGQAASNLIERSNLEQMVGQLMEMGGGNWDRETV
LLALRVAYNNPERAVEYLYSGIPATAEIAVPVDPFPSSQAFAQGADSTDLAAPGHPSGAP
NSSPLNMFPQGNINTGVGTGGGSLDFLRNNQQFLALRAMVQANPQILQPMLQELSKQNPQ
LLRLIQEHHAEFLQLINEPIEGFEGDMFDQADQDEMPHTINVTAEEQEAIRRLEAMGFDR
ARVIEAFLACDKNEQLAANYLLEHAGDED
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgacggtgaagacgctgaagggcacccacttcgtgatccgggttcagcccaac
gacacgattattgctgtgaagaaaaacattgagcaagaacaaggaaaagacagctatccg
tgggggcaacaattgctgattcataatggaaaagttttaaaagatgaaaccacattggaa
gagaacaaagttaatgaagatggtttccttgttgtcatgcttagcaagagtaaagctgca
ggctccagtgggtcttcatctgcacagcctccaacaacttctgcagtccagcatcctgct
cccaaggaacctccagctcaagttccagtgcaagttccagctcaagtttcagcacaagct
ccatcgcaagttcctgcacaagttccacctcgaatttcagcagaagctccatcacaaatt
ctggcatctgctgacgcctatggtcaagctgcatctaatttaattgagaggagtaatctt
gagcagatggttggtcaattgatggagatgggtggtggtaactgggatagagagacagtt
ttgcttgcacttcgtgttgcttacaacaacccagagcgtgctgtggaatacttgtattct
ggtatcccagcaacagcagaaattgcagttccagttgatcctttcccttcatctcaggca
tttgctcaaggggctgattcaactgatttagctgctccaggtcatccctctggtgcacca
aattcctctcctttgaatatgtttccacagggcaatattaatactggagtgggtactggt
ggtggatctctcgacttcctgagaaataaccaacagttcttagctctgcgggcaatggtt
caagcaaatccacagattttgcagccaatgcttcaggaactaagcaagcaaaatcctcaa
cttttaagattgatacaagagcaccatgcagagtttcttcagttaataaatgaacctatt
gaagggtttgaaggggacatgtttgatcaggctgatcaagatgagatgccgcataccata
aatgtgacagctgaggaacaggaggcaatccgaagacttgaagcaatgggatttgaccga
gcacgcgttatcgaagcattcctagcttgcgacaagaatgagcagttggcagcaaactat
ttattggagcatgctggtgatgaagattga
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