Musa acuminata (dessert banana): 135610935
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Entry
135610935 CDS
T03447
Name
(RefSeq) uncharacterized protein LOC135610935
KO
K12589
exosome complex component RRP42
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135610935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mus03019
]
135610935
Messenger RNA biogenesis [BR:
mus03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
135610935
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
135610935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
135610935
NCBI-ProteinID:
XP_064962112
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All DBs
Position
BXJ2-4:41398879..41403387
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AA seq
287 aa
AA seq
DB search
MVGLSEGEKRFIRGGIAQDLRTDGRQRLHYRPISVVTGVIPQANGSARVRLGATDVIVSI
KAELGKPHPLQPDKGKVAIFIDCSPTAAPMFEGRGGEELSTELSFALQRCLLGGRSGAGA
GIDLSSLVIVEGKVCWDLYIDGLVVSSDGNLLDALAAAIKVALSNTGIPKVTVNLGASPN
DQPDVDVSDEEFLQFDTSGVPVVVTLTKVSRHYIVDATSEEESQMSSAVSISVNRHGHIC
GLTKRGGAGLDPSVILDMISVAKHVGEQLMSLLDSEIAAAEASAEDQ
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atggtggggctgtcggagggagagaagcgcttcatacggggcgggattgcacaggatctc
cgcaccgatggccgccaaagactccactaccggcccatatctgttgtaacaggggtcatt
cctcaggcaaatggttctgctcgagttagattgggcgcaaccgatgtgattgtaagcatc
aaggcagaattagggaagccacaccctcttcaacccgacaaagggaaagttgccattttc
attgactgcagcccaacagcagcacccatgtttgagggaaggggaggtgaagaactgtct
acagagctctcatttgctctccagagatgcctactaggtggaaggagtggagcaggggct
ggaattgacctctcatcactagtcattgttgagggcaaggtatgctgggatttgtacatt
gatggacttgttgtgagttcagatggaaacctacttgatgcattggctgctgctatcaag
gtagctttgagcaatacaggcattccaaaggtcaccgtcaatcttggagcttcacctaat
gaccaaccagacgtcgacgtcagtgatgaagagttcttgcagtttgacactagtggagta
cccgtcgtagtgactttaactaaggtcagcaggcactacattgtagatgcaacctcggaa
gaggagtctcaaatgagctctgcggtgtctatttccgtgaatcggcatggccacatctgt
gggttgacgaaacgagggggtgcaggcttagaccccagtgttattcttgacatgatatcg
gtagcaaagcatgtcggggagcagctgatgtcgttactggattcagagattgctgctgca
gaagcatccgccgaggaccagtaa
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