KEGG   Musa acuminata (dessert banana): 135610960
Entry
135610960         CDS       T03447                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 9A-like isoform X1
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
mus  Musa acuminata (dessert banana)
Pathway
mus03020  RNA polymerase
mus03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mus00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    135610960
  09124 Replication and repair
   03420 Nucleotide excision repair
    135610960
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mus03021]
    135610960
   03400 DNA repair and recombination proteins [BR:mus03400]
    135610960
Transcription machinery [BR:mus03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     135610960
DNA repair and recombination proteins [BR:mus03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      135610960
SSDB
Motif
Pfam: Zn_ribbon_RPB9 Zn_ribbon_4
Other DBs
NCBI-GeneID: 135610960
NCBI-ProteinID: XP_064962169
LinkDB
Position
BXJ2-4:complement(41765132..41770362)
AA seq 151 aa
MKCGRVSSTSERVIRVLGLAKGFGARIGSAAEMSVMKFCRGCNNVLYPKEDREQRILLFA
CRNCDHQEVADDCIAYRMEINHSVGECSQVLQDVAADPALPRTRNVRCANCNRPEAVFFQ
MYHGFSIQLLDFFHEHVWLFSHVVIKQLLQP
NT seq 456 nt   +upstreamnt  +downstreamnt
atgaaatgtggacgcgtgtcgagcacttctgagagggttataagggttttaggtttggcc
aaaggattcggagcgcgaattggatcagcggcagagatgagcgtgatgaagttctgccgc
ggatgcaacaatgttctgtatccgaaggaggacagggagcaaaggatcctcctcttcgcc
tgccggaactgcgatcaccaggaggttgccgatgactgtatcgcctatagaatggagata
aatcattctgttggtgaatgctctcaagtgctacaggatgtagcagctgatccagctctc
cctcgcacaaggaatgtcagatgcgcaaattgcaatcgcccagaagctgtattctttcag
atgtatcatggcttcagtatacaacttttggacttttttcatgaacatgtttggttgttc
tcgcatgttgtcattaaacagttgcttcagccgtga

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