Musa acuminata (dessert banana): 135611006
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Entry
135611006 CDS
T03447
Name
(RefSeq) protein CHROMATIN REMODELING 20-like isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
mus
Musa acuminata (dessert banana)
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mus03000
]
135611006
03036 Chromosome and associated proteins [BR:
mus03036
]
135611006
Transcription factors [BR:
mus03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
135611006
Chromosome and associated proteins [BR:
mus03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
135611006
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
ADD_ATRX
DUF7060
Motif
Other DBs
NCBI-GeneID:
135611006
NCBI-ProteinID:
XP_064962276
LinkDB
All DBs
Position
BXJ2-4:complement(42466231..42497722)
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AA seq
1533 aa
AA seq
DB search
MAEHINKERKPMDVEVVVLEEENEVECIDNKHKEKDDHVHLKENGKGDLHIVKHNKDEGD
IGPKECSGSGVEVKVEEKVNNDEDLASDSFEMLVDDSDNEQSSASDYDDKAKNEAPLTDA
EVEELVAEFLEIESKAAEAQESLEQESLAQVEREVRSELAESLHGDALELAVSNEMKVLV
EEWEDVLDNLETQSALLLEQLDGAGIELPSLYKWIESQVPGGCRTEAWKTRAHWVGSVAT
SELNQSVKDAEQYLQSCHPVRRKHGRLHESGSSGYLAKNLSVKDGDNLIKNSEKDWQIFD
EIIHSGRFSDSNSFGSNNWAAVYMASTPQQAANLGLHLPGVNEVEEIGEIEGNSFYDEAT
QNEKEIGLSEEQKRNYRKVREEDDVKITKKLQCRLKQRRKRKRKYQELVENDVLDGVAQL
NESQLIFRDPSSSGADVDHPVAVAEDLKPEIPNKPKNEIPIQNDTIKRSCESEDVELDNK
RHRTVIIESDDEVQVIDDKSPSHDLIRDQCLTAQVREVVDVIDSDVLSSPTPANNDSLMD
IPEKFHCTACSEVLKASEVQRHPTLEVIVCTKCNLLIEEKMRIEDPDLGVYCRWCGKCDD
LIRCKSCKMLFCAMCIARNFGETRFLDVETNGWDCCCCSPVLLHQFISECEKALKGFMVS
SSESESELSDGQMVVRLGHKKRRKKRIRRIIDDTELGEETRRKIAMEKARQEHLKSMQAQ
SVGKFCNTRSNESVGEVSLDDAIEGYIVNIAREKDEEPVRIPQSISAKLKPHQIAGIRFM
WENIIQSVKKVKSGDIGLGCILAHTMGLGKTFQVIAFLYTAMRKIDLGLRTALIVTPVNV
LHNWRQEFVKWRPTELKSLRVFMLEDVARERRADLLSKWRVKGGIFLIGYAAFRNLSLGR
HVKDRSTASEICHALHYVPDILVCDEAHMIKNTRADITQALKQVKTQRRIALTGSPLQNN
LMEYYCMVDFVREGYLGSSHEFRNRFQNPIENGQHTNSTIDDVRIMNQRSHILYEQLKGF
VQRMDMNVVKKDLPPKTVFVITVKLSPLQRKLYRKFLDVHGFTGDKISSERTIRPRCFFA
NYQALAQVWNHPGLLQVAKEHRDYLRQEDAVENFLVEDGSSDDNMENDFSNGEKQKAKDD
IFYKRNDGVFYHQETDWWTDLLGEKIYQEVDYSGKMVLLLDILTMSSEVGDKVLVFSQSL
TTLDLIEMFLSKLPRKESEGKFWKQGKDWYRLDGSTQSSERQKLVERFNEPTNKRVKCTL
ISTRAGSLGINLYAANRVIVVDGSWNPTYDLQAIYRVWRYGQTKPVYAYRLMAHGTMEEK
IYKRQVTKEGLAARVVDRQQIHRTMSKEEILHLFDFGDDENADMLEQDHRNPMTSSHDET
NEVGCLGNHECLPFNTADKLMENLLRRHYPRWIANYHEHETLLQENEAERLSKEEQDMAW
QTYRRSLEWEEVHRTTLDGGDRVANSNTPPEIIVSQQTKGSSRSRPVKQRKCTNLAHLLT
LRSQGIKPGFSTVCGECSQEISWENLNRDGRSR
NT seq
4602 nt
NT seq
+upstream
nt +downstream
nt
atggctgagcatataaacaaagaaagaaaaccgatggatgtggaagtggtagtgttagaa
gaagaaaatgaggtagagtgcatagacaacaaacacaaagaaaaagatgaccatgtacac
ctgaaagagaatggaaaaggagaccttcatattgtgaaacataacaaagatgagggtgac
attggaccaaaggagtgcagtggatcgggggtagaagtaaaggtggaggagaaagtcaat
aatgatgaagatctggcaagtgactcttttgaaatgcttgttgatgattcggataatgag
caatcatcagcatctgattatgatgacaaagcaaagaatgaggcacctttaactgatgcg
gaagttgaagaacttgttgctgagtttcttgaaattgagagcaaggcagctgaggcacaa
gaatcacttgaacaagaatcacttgcccaagtggaacgtgaagtaagatctgagcttgct
gagagtctccatggggatgcgttggaattagctgtatcaaatgaaatgaaagtactcgta
gaagaatgggaggatgttcttgataatttagagactcagagtgctctactattggaacaa
cttgatggagcaggaattgagctccctagtctttacaaatggatagaaagtcaagttcct
ggtggatgtcgtaccgaagcttggaaaacaagggctcactgggtgggttctgttgcaact
agtgaacttaaccaatctgttaaagatgctgaacagtaccttcaatcctgtcaccccgta
aggaggaaacatggtcgtctgcatgagagcggctctagtggctatttagccaaaaatctt
tctgtcaaagatggtgacaatctcatcaaaaattctgaaaaagattggcagatatttgat
gagattattcattctggtcgattctcagacagtaactcatttggtagcaataactgggcg
gccgtttacatggctagtactccccaacaagctgcaaatttgggtctccatttgcctgga
gttaacgaggtagaggagattggtgaaattgaagggaattctttctatgacgaggcaacc
caaaatgagaaagagattggattgtctgaggaacaaaagagaaactatagaaaggtgaga
gaggaggatgatgtgaagattacaaagaaactgcagtgtcgtttgaaacagaggagaaag
aggaaaagaaaatatcaggaacttgttgagaatgacgtattggatggtgtggcacaatta
aacgagtctcagttaatttttagagacccaagctcatctggtgctgatgttgatcatcct
gttgctgttgctgaagacttgaagcctgaaattcctaacaaacctaagaatgaaattcca
attcaaaatgacacaatcaagaggtcatgtgaaagcgaggatgttgaacttgacaataaa
aggcatcggacagtcatcatagagagtgacgatgaagtgcaagtgattgatgataagtca
ccatcacatgatttaatcagagatcaatgtttgacagctcaagttagagaagttgttgat
gttatagatagtgatgtcctttcttcacctactccagctaataatgacagccttatggac
attcctgagaagtttcattgtactgcttgttctgaagtgctgaaagcttctgaagtgcaa
agacatccaactctggaagttattgtgtgtacaaaatgtaatcttctgatagaagagaaa
atgagaatagaggatcctgatttaggtgtctactgcagatggtgtggtaagtgtgatgac
ctaataaggtgtaaatcatgtaagatgctattctgtgctatgtgtatagcaagaaatttt
ggtgaaacacggtttttggatgttgaaacaaatggttgggactgctgttgctgctcacca
gttctgttgcatcagtttatttcagaatgtgaaaaagctcttaaggggttcatggtttct
agctcagagagtgaatcagagctttcagatggtcaaatggttgtcagacttggccacaaa
aaaagacgaaagaagaggattaggagaattatagatgatacagaacttggtgaagaaacc
aggagaaaaattgcaatggagaaggctaggcaggagcatcttaaatcaatgcaagcacaa
tctgttggtaaattttgtaataccagaagtaatgaaagtgtaggggaagtttcattggat
gatgcaattgaaggttatatagtcaatattgcaagggagaaggatgaggagcctgtgaga
atcccacagagcatttctgcaaagttgaagccccaccagatcgctgggatacgatttatg
tgggaaaacattatacagtctgtcaaaaaggtcaaatctggggatataggtcttggatgc
attttagctcacacaatgggccttgggaaaacttttcaggttattgcatttttgtacact
gctatgagaaaaattgatctaggtttaagaacagctcttattgttacacctgttaacgtg
cttcataactggcgacaagaatttgtgaagtggcgaccaacggagttaaagtctcttcgt
gtgttcatgttggaagatgttgcaagggaaagaagagcagatttactttcaaaatggaga
gtcaagggtggaatttttctaatagggtatgctgctttccggaacttgtcccttggaagg
catgtgaaggataggagtacagccagtgaaatttgtcatgccttacattatgtgcctgac
attctagtctgtgatgaggcccacatgattaaaaatacaagggctgatataacacaagca
ttaaaacaagtaaagacacaaagaagaattgccttgacaggatcacctttgcagaacaat
ttgatggaatattattgtatggttgattttgtaagggaaggatatcttgggagcagtcat
gaattccgtaatcggttccagaatccaatagaaaatggtcagcacactaattctaccatt
gatgatgtgagaattatgaatcaaagatcacacattctgtatgaacaactaaaaggattt
gtccagcgaatggacatgaatgttgtgaagaaggatctccctcctaaaacagtttttgtt
attaccgttaaactttctcctttgcaaagaaaattgtatagaaagttcttagatgtacac
ggttttacgggagataaaatttcttctgaaagaacaattagaccacggtgtttctttgct
aactatcaagcattggctcaggtatggaaccatcctggtcttttgcaagtggctaaagaa
cacagggattacttacggcaagaagatgctgttgagaacttcttggtggaagatggctca
agtgatgataatatggaaaatgacttctcaaatggagagaaacaaaaggcaaaggatgat
atattttacaagagaaatgatggagtcttttaccatcaggaaactgattggtggacagat
cttcttggtgaaaagatttaccaagaagttgattacagtggtaaaatggttttgctactt
gatatcctcaccatgagttctgaagtaggtgacaaggtattagttttcagccaaagcttg
acaacactagatttaatagagatgtttctgtcaaaactgccacgcaaagaaagtgaaggc
aagttctggaagcaaggcaaggattggtataggctggatggtagtacacagagttctgaa
aggcagaagctggtagagagatttaacgaacccacaaataagcgagtgaaatgcaccttg
atatctacacgtgctgggtcactgggcattaacctttatgctgctaatcgtgttattgtt
gttgatggttcatggaatccaacctatgacctgcaggcaatatatcgggtttggaggtat
gggcaaaccaaacctgtctatgcttaccgcttgatggcacatggaaccatggaagaaaag
atatataagcggcaggttactaaggaaggacttgcagcaagggtggtggacagacaacaa
atacatagaacaatgtccaaggaggagatactgcacctctttgactttggtgatgatgaa
aatgcagacatgcttgagcaggaccatagaaatccaatgacatctagtcatgatgaaacc
aatgaggttggctgtttggggaatcacgaatgcctgccttttaacaccgctgacaagctc
atggaaaacttacttagaagacattatcctcgctggattgcgaattaccacgaacacgaa
acccttttacaggagaatgaggcagagagattatccaaagaggaacaagacatggcctgg
caaacttatcggagatcgttggagtgggaggaagttcacagaaccacacttgatggcggt
gatcgagttgctaacagtaatacgccgccagaaatcattgtttcccaacaaaccaagggc
agttcaaggagccgccctgtcaagcagaggaaatgcaccaacctagcccacttgctaact
ttgagaagccagggcatcaagcccggattcagcacggtctgtggagaatgctcgcaagag
atcagctgggagaacctcaatcgagacgggagatccagatga
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