Musa acuminata (dessert banana): 135611013
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Entry
135611013 CDS
T03447
Name
(RefSeq) vacuolar protein sorting-associated protein 54, chloroplastic-like isoform X1
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
mus
Musa acuminata (dessert banana)
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mus01009
]
135611013
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mus04131
]
135611013
Protein phosphatases and associated proteins [BR:
mus01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
135611013
Membrane trafficking [BR:
mus04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
135611013
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54
Syndetin_C
Vps54_N
DUF7791
Motif
Other DBs
NCBI-GeneID:
135611013
NCBI-ProteinID:
XP_064962292
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All DBs
Position
BXJ2-4:42572477..42597804
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AA seq
1024 aa
AA seq
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MEAAPPARLRDPSSFGRSSSASGRSSHDLDSPSFSSAGAGAVSHSLASILNNPHAGRSDV
SWTLWWPSASAAAPDLAAPIVPSVSFPEVARADFLPYLASVSDAYSRFEDILNHRSKESA
AAAASGDGEIRGQGEALVACLREVPSLFFKEDFALEEGATFKAACPFSPSAEENTALQER
LTQYLDVVEMHLVREIALRSDSFYEAQGQLQGLNGQIVEACVRIRELKETIRILTGDLVG
SARKVQELNATRGNLVALQQKLTVILYVSQALGALKLLVAAADCAGALDVIDDLQQLLET
DELVGLHCFRHLREQLSGGLDSINSILSAEFLRAAIRDAKGVDSMILSKLRTKASDLMNG
VDDEVKLDDDESSNLQDRLLPLIIGLLRTAKLPAVLRLYRDTLITEMKAAIKATVAALLP
VLLSRPLDSDLITGDRVGDSDGGGLSLASKLRSLSSESFVHLLNAIFKVVQAHLMRASEV
KRVIEWIMGNLDGCYVADSVAAAVAHGAAVAAAAEGVQENNGHIISHVSHSLSRNPPKIS
TIQGKVNDVSSPSTSKNFRADVLRENTEAVFAACDAAHGRWAKLLGVRALLHPKLRLQEF
LSIYDITQDFIAATEKIGGRLGYSIRGTLQSQSKAFVDFQHDSRMTKIKAVLDQETWVAM
DVPDEFQAIVLSLSSGDALLSNSDLASSNPDSGTVIAGFPASQEHISESDSGQTVDRDNQ
AKPIPSAGSNQETNAASATSKRNSDANTNEHGRASSQTLVYRGVGYHMVNCGLILLKMLS
EYVDISKFLPALSSEVVHRVVEMLKLFNMRTCQLVLGAGAMQVSGLKSITSKHLALASQI
VSFVYAIIPEIQRILFLKVPETRKALLTLEMDRVAQDYKIHRDEIHMKLIQIMKERLLAN
LRKLPQIVESWNAPEDNDSQPSQFARSITKEVTYLHRILSQILLEADVQAIFRQVVHIFH
SHISEAFSKLELNTPQAKNRLCRDVQHILGCIRKLPSDNSSKESVPNYGLLDEFLEEKYG
TKVG
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atggaagcagcgccgcctgcccgtctccgcgatccgtcctcctttggacgctccagctcc
gcctccggcagatcatcgcacgatctcgattctccttccttttcctcggctggtgccggt
gccgtcagccacagcctcgcctccatcctcaacaacccccacgccggccgctccgacgtt
tcttggaccctatggtggccctccgcttccgcagctgcccccgaccttgccgcccccatc
gtcccctccgtatccttccccgaggtcgcccgcgccgactttctcccatacctcgcctct
gtctcggacgcgtactcccggttcgaggacattctcaaccatagatctaaggagagcgcc
gccgccgctgctagcggcgatggagagatccgggggcagggggaggccctggtggcatgc
cttcgggaggtgccgtcgctattcttcaaggaggatttcgcgttggaggagggggccacg
ttcaaggctgcgtgccccttctcgccttcggccgaggagaacaccgcgctccaggagagg
ctgacgcagtacctggatgtggtggagatgcatctggtgagggagatcgcgttgcggtca
gattcgttctacgaggcccaggggcagcttcaggggctgaatgggcagatcgtggaggcg
tgcgtgaggatacgggagttaaaggagacgatccggattctgacaggagatcttgtggga
tcagcgaggaaagtgcaagagctgaatgccacgcgaggaaaccttgtagcacttcagcag
aagctcactgtcatactctatgtcagccaagcactcggcgcattaaaactgcttgttgca
gcggcagattgtgctggtgctttagatgtaatagatgacctgcagcagttgctggaaacc
gatgagcttgttggtctccattgtttccgtcatcttcgtgaacagttgtcaggtggcttg
gattcaataaatagcattctttcggcagaattcttgcgtgcagcaatacgtgatgcaaag
ggtgttgactccatgattctatcaaaattaagaacaaaagcttctgatctcatgaatgga
gtggatgatgaagtgaagttagatgatgatgaaagctcgaatctccaagatcgtcttctc
cctctgattattggtctattgagaacagcaaagcttccagctgtgctgaggttgtaccgt
gatacacttattactgaaatgaaagctgcaataaaagctacagttgcagctttgcttcca
gttctattatcccgacctctagattcggatctgattactggagatcgtgttggtgattca
gatggtggaggtttgtcactggcaagcaagttgaggagtctatcctctgaaagctttgtt
catcttttgaatgctattttcaaagttgtacaggcacatttgatgcgggcttcagaagtt
aaaagagtcattgagtggattatgggaaaccttgatggatgttatgttgctgactctgtt
gctgctgcagttgcgcatggtgcagctgtagctgctgctgcagagggtgttcaggagaat
aatggtcatattatttcacacgtatctcattccctttccaggaatccacctaaaatctcg
acgattcagggaaaggtgaatgatgtgtcaagtccgagcacatccaaaaatttccgtgct
gatgtactgcgggaaaacacagaagccgtatttgccgcttgtgatgctgcgcatggaaga
tgggctaaactccttggtgttcgtgctcttcttcaccccaaattaagactccaagagttc
ttaagcatttatgacataactcaggactttattgcagctacagagaagattggtggaaga
ttaggctatagcattcgtggaactcttcagtcacagtcaaaagcgtttgttgattttcaa
catgattcccgaatgacaaagattaaggcagtccttgatcaagaaacttgggttgccatg
gatgttcctgatgaattccaggccatagttctctcattatcttctggtgatgcattatta
agcaatagtgacctagcgtcaagcaatcctgattctgggactgttatagcaggttttcct
gctagccaagaacatattagtgagagtgattctggccaaactgtagatcgagacaatcaa
gctaaacccattccatcagctgggtcaaaccaagaaaccaatgcagcgtctgcaacttct
aaacggaatagtgatgctaatacgaatgaacatggaagagcatcttctcaaacacttgtg
tatcggggtgttggctatcacatggtaaactgtggtttgatattgttaaagatgttatcc
gagtatgttgatattagtaagttcttgccagcattgtcatctgaagtggttcatcgtgtt
gtggaaatgttgaaactattcaacatgaggacttgtcagcttgttctcggtgctggtgcc
atgcaggtatcaggtttgaagtccataacttctaagcatttagctttggcaagtcagatt
gtcagttttgtttatgctatcataccagagattcagcgaattctcttcttgaaagtgcct
gagactcgtaaagcattgttaacattagagatggatcgagtggctcaggattacaagatt
caccgagatgagattcatatgaagctgattcagataatgaaggaaaggttgctggcaaat
ctccgcaaactgcctcaaattgtcgagagttggaatgcacctgaagataatgactcacag
ccaagtcagtttgctcgatccatcacaaaggaagttacttatcttcatcgcattttatct
caaatccttcttgaggctgacgttcaagctattttcaggcaagtggttcacatttttcat
tcccatatttcggaagcattttcaaaattggagcttaacactccccaagccaaaaataga
ctctgccgtgatgttcagcacattcttgggtgcatccgcaagttgccttctgataattca
agcaaagaaagcgtgccgaattatggtcttctcgatgagttcttggaggagaaatacggg
acaaaagtaggataa
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