Musa acuminata (dessert banana): 135611096
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Entry
135611096 CDS
T03447
Name
(RefSeq) coatomer subunit alpha-3-like
KO
K05236
coatomer subunit alpha
Organism
mus
Musa acuminata (dessert banana)
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mus04131
]
135611096
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mus04147
]
135611096
Membrane trafficking [BR:
mus04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
135611096
Exosome [BR:
mus04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
135611096
Exosomal proteins of bladder cancer cells
135611096
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
WDR55
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML_2
TPR_COPA_B
WD40_Gbeta
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
Beta-prop_WDR41
ANAPC4_WD40
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_Aladin
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
ENTH
Beta-prop_ACSF4
WD_LRWD1
Fis1_TPR_C
Gag_FV_central
Zn_ribbon_19
zf-CHCC
Motif
Other DBs
NCBI-GeneID:
135611096
NCBI-ProteinID:
XP_064962480
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All DBs
Position
BXJ2-4:43657523..43662722
Genome browser
AA seq
1216 aa
AA seq
DB search
MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYSMGTLIDRFDEHDGPVRGVHFH
KSQPLFVSGGDDYKIKVWNYKTRRCLFTLLGHLDYIRTVQFHDEHPWIVSASDDQTIRIW
NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTIRVWDIGSLRQKVVPADDSLRL
SQMNTDLFGGIDAVVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNDSKAWEV
DTLRGHTNNVSSVMFHTKMDIIVSNSEDKSIRVWDATKRTGVQTFRREHDRFWILAVHPA
MNLLAAGHDSGMIIFKLERERPAFSVSGDTLYYVKDRFLWLYEFSTQKDIQVVPIRKPGS
VSLNQGPRTLSYSPTENAVLICSDVDGGSYELYIVPKDISLRSDYMQEAKRGAGGSAVFI
ARNRFAVLDRSTNQVVVKNLKNEIVKKSLLPIATDAIFYAGTGNVLCRAEDRVAIFDLQQ
RIVIGELQTPSVKYIVWSSDMESVALLGKHAIVIANKKLVLRCTMHETIRVKSGAWDDNG
VFIYATLNHIKYCLSNGDTGIVRTLDETIYITKISGSNIFCLDRDGKTRVISIDATEYIF
KLSLMQKRYDHVMGMIRNSQLCGQAVIAYLQQKGFPEVALHFVKDEKTRFNLALESGNIQ
IAVASAKEIDDKDHWYRLGIEALRQGNTNIVEYAYQRTKNFERLSFLYLVTGNMEKLSKM
LRIAEIKNDIMGQFHNALYLGDIQERVKILENAGHLPLAYVTAATHGLQEVADRLATELG
DNVPSLPEGKTHSLLMPPAPLMCGGDWPLLRVMRGIFDNGSDMGRAGQEEEEDAAGADWG
DEELDIVDMEGVMQNGEIIADLEDGEGNIENEEEGGWDLEDLELPADVDTPKAAGNSRHS
LFVTPTPGMPVSQIWIQKSSLAGEHVAAGNFDTAMRLLSRQLAIKNFAPLKPLFMDIHMG
SHSYLYALATAPIISIAVEKGWNESASSSGGGPPALVFRFSQMDEKLKAAYRATTEGKFP
DALRQFLNILHTIPLIVVDSRREVDEVKELIDIAREYVLGLKIELKRKEIKDNLVRQQEL
AAYFTNCKLQKIHMRLVLTSAMTICYKGGNCSTAANFARMLLESSPTEVQAKKARQLLQH
CGDKKDVNQLDYDYRNPFVVCGATFVPIYRGQKDVSCPYCGARFVPTIEGHLCAVCELAV
VGADASGLLCSPTQIR
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgctgaccaaattcgagaccaagagcaatcgggtgaaggggctgagcttccacagcaag
cggccctggatcctcgccagcctccacagcggtgtgatccagctatgggactacagcatg
ggcacgctcatcgatcggttcgacgagcacgacggtcccgttcgtggcgtccacttccat
aaatcgcagcccctcttcgtctccggaggggatgattacaaaatcaaggtctggaattat
aagacccgccgttgtctatttacccttcttgggcatcttgattacatccgtacagttcaa
ttccatgatgagcatccctggattgttagtgctagtgatgatcaaaccattaggatttgg
aactggcaatcacggacctgcatttctgtgttaaccgggcacaatcactatgtcatgtgt
gcctcattccatccaaaggaggacctggttgtatcggcttcccttgatcaaacaattcgt
gtctgggatattggttctctgaggcagaaggtggtaccagctgatgacagtctgcggctt
agtcagatgaacacagatttgtttggtggaattgatgcagttgtcaagtatgtcttagaa
ggtcatgaccgtggggtcaattgggcatcattccatcctactttgcccctaatcgtgtct
ggtgctgatgaccggcaagtgaaactctggagaatgaatgattcaaaggcttgggaggtg
gacacattgagagggcacactaacaacgtttctagtgtgatgttccacacgaagatggat
atcattgtatccaactcggaggacaaaagcattcgtgtttgggatgctacaaaacgcaca
ggtgttcagacatttagacgtgagcatgaccgcttctggattcttgctgtgcatccagct
atgaaccttcttgcggcaggtcatgatagcggcatgatcatcttcaagttggagagagaa
cgccctgctttctctgtcagtggagatactctatactatgttaaagatcgcttcttgtgg
ttgtatgagttctcaacccagaaggacattcaggttgttcctataaggaagcctggttct
gtcagcttaaaccagggacctagaacactgtcttatagtcccacggagaatgctgtattg
atctgttctgatgtggacggtggatcttatgagttatatattgttcctaaggacatatct
cttaggagtgactatatgcaggaagcaaaaaggggggctggtgggtcagcagttttcata
gcccgcaatagatttgctgttctggacaggagtaccaatcaagtagtagtgaagaacctg
aaaaatgagatagtaaagaaaagtcttcttccaatcgctactgatgcaatattttatgct
gggactggtaacgtgttgtgcagagctgaggacagggtggccatctttgatcttcagcag
aggattgtcattggtgagctgcagaccccatctgtcaagtacattgtctggtcaagtgat
atggaatctgttgctttgcttggtaagcatgctatagtcattgctaataagaaacttgtg
cttcgttgcacaatgcacgagacaattcgtgtaaaaagtggtgcctgggatgataatggt
gttttcatttatgcaacattaaatcatatcaagtattgcctaagtaatggggacaccgga
attgtaagaaccctggatgaaactatttacataaccaagatatctggaagcaatattttt
tgcttggatcgcgatgggaagacccgggttatatcaattgatgctacagagtacatcttc
aagctttctcttatgcaaaaaagatatgaccatgtgatgggtatgataaggaattcacag
ttatgtggtcaggctgtaattgcatatcttcaacagaaaggctttccagaagttgctctc
catttcgttaaggatgagaagacccgatttaatctggctcttgagagtggtaatatccaa
attgctgttgcttcagcaaaagagattgatgataaagaccattggtacaggttgggcatt
gaggcccttcgacagggaaacactaacattgtagaatatgcatatcagaggacaaagaac
tttgagaggctctcatttctctatcttgtaacagggaatatggaaaagctatccaaaatg
ctgaggatagctgaaattaagaatgacatcatgggtcagttccacaatgcactgtatctt
ggtgacattcaggaacgtgtcaaaatactggagaatgctggtcatttgcctcttgcatat
gttacagctgccactcatggacttcaggaagttgctgataggcttgcaactgagctggga
gataatgttccttcattacctgaaggaaagacccattctcttctaatgcctcctgcacca
ctcatgtgtggtggggattggcccttactaagggtaatgagaggtatctttgacaatggt
tcggatatggggagggcaggacaggaggaagaggaggatgctgctggtgctgactggggt
gatgaggaactggacattgttgacatggagggagtgatgcagaatggtgaaataatagca
gatcttgaggacggtgaaggaaatatagagaatgaagaagaaggaggatgggatcttgaa
gatctggaattaccagctgatgtggatacaccaaaagctgcaggcaattctcgccattca
ttgtttgttaccccaacacctgggatgcctgtaagtcaaatctggatccagaaatcatct
cttgctggggagcatgtggcagctggaaactttgacactgccatgcgcttgctcagccgt
caattggctataaagaactttgcacctttgaagccactattcatggatattcacatgggc
agtcattcttatctgtatgcgcttgctactgcaccgattatatcgattgctgttgaaaag
ggatggaatgagtctgctagctctagtggaggaggtccaccagcacttgtcttcaggttc
tcacagatggatgagaaacttaaggcagcttatcgagccacaacagaaggaaagttccct
gatgctttacgccaattccttaacattttgcacaccatccctcttattgttgttgactca
aggagggaagttgatgaagtgaaggagctgattgacatagccagagaatatgttctaggt
ttgaaaattgagctcaaaagaaaggaaatcaaggacaatttggttcgacagcaagaacta
gcggcctatttcacaaattgtaagcttcagaagattcatatgaggctcgtcctcacaagt
gctatgaccatctgctacaagggagggaactgctctacagcggctaattttgcaaggatg
cttcttgagagcagcccaacagaagtccaggcgaagaaggctaggcagctgttgcaacat
tgtggtgacaaaaaagatgttaaccagctcgattacgattataggaatccatttgtggtt
tgtggggcaacttttgttccgatctaccgtggccagaaagatgtttcttgcccttattgt
ggagctagatttgtgccaaccattgaaggtcatctttgtgctgtttgtgagcttgcagtg
gtaggagcagatgcatctggcctgctctgctcgcctacacagataagataa
DBGET
integrated database retrieval system
