Musa acuminata (dessert banana): 135611312
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Entry
135611312 CDS
T03447
Name
(RefSeq) E3 ubiquitin-protein ligase ATL42-like
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
mus
Musa acuminata (dessert banana)
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mus04121
]
135611312
Enzymes [BR:
mus01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135611312
Ubiquitin system [BR:
mus04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
135611312
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-ANAPC11
zf-C3HC4
zf-RING_UBOX
zf-RING_16
zf-C3HC4_3
zf-RING_5
zf-RING-like
zinc_ribbon_16
zf-C3HC4_5
zf-C3H2C3
zf-RING_4
Tmpp129
Motif
Other DBs
NCBI-GeneID:
135611312
NCBI-ProteinID:
XP_064963052
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Position
BXJ2-4:complement(6171299..6172740)
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AA seq
423 aa
AA seq
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MPSLDNTPFSLRFVFFLVLLVPATVASAQHADAEFLPSETAKVSFGPSVAIAIGVFATML
SLTVLLLVYVKCRWSMPSESIIPAPTRQTRHQLSGIDRTVVESLPFFRFASLRGVRDGLE
CAVCISKFDGDEVLRLLPKCKHAFHIDCVDRWLEGHSSCPLCRCKVTAVDVARFAYSTSS
RFLFASGRHETSGRELELFVERERNHDAEHRGSSRFGIGTSFRNMDRSTKEKEKLSILEE
ATGGDHFLHKFKHRIVVSDNVFKGRWSALNSSDLASLTSDLLSITLNERFALLGLNEQTT
GEEKIFVDGKETTEENSLLKAKVNQIGALTSATNPNIPSPSNDNGNLISPASRASISSAN
RSMSDITNLSRSRQERDPGNSTSSRDEDEKLRRLWLPIARRTVQCFAGRSDRRLSTATEI
SNV
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgccttctctcgataacactccgttttctcttcgtttcgtcttcttcttggtgttgttg
gtccccgccaccgtcgccagcgcacagcacgccgatgcggagttcttgccgtcggagacc
gcgaaggtctcgttcggcccgagcgtggcaatcgcgatcggcgtcttcgctaccatgtta
tcgctcaccgtcctcctgctcgtgtacgtgaagtgccgttggtcgatgccctcggaaagc
atcatccctgcacccacccgccaaacccggcatcaattgtcaggcatcgacaggaccgtc
gttgagtcgctccccttcttccgcttcgcgtcgctccgcggcgtccgcgacggcctcgaa
tgcgccgtctgcatatccaaattcgacggcgatgaggtcctccgcctgctgcctaagtgc
aagcacgcgttccacatcgactgtgtcgatcgctggctcgagggccactctagctgcccg
ctatgccggtgcaaggtcaccgccgtggacgtcgcccggttcgcgtactccaccagctcc
aggttcttgtttgcctccggtcggcacgagaccagcggacgtgaactcgagctgttcgtc
gagcgggagcgcaaccatgatgccgaacaccgcgggtcatcaagattcgggatcggaact
agcttccggaacatggacaggagcacgaaggagaaggaaaagctgtcaattctagaagaa
gcgaccggtggagatcatttcttacacaagttcaagcacaggattgtggtctccgacaac
gtgttcaaaggccggtggagcgccctgaactcatcggatttagcgtcattgacctccgat
ctactaagcattacgttgaacgaacggtttgcgcttctcggtctgaacgagcagacaact
ggagaagagaagatcttcgtcgatggtaaggagacgacggaggagaatagtctgcttaaa
gccaaagtaaaccagatcggtgcacttacgtcggctacgaatccaaacattccctcaccc
tcgaatgacaacgggaatttgatcagccctgcatcgagagcttcgatttcctcggcaaac
agatcgatgtctgatatcacaaacctgtctagatcaagacaagaacgagatccaggcaac
agcacgtcgagcagagacgaagatgagaagctgaggcggctttggctgcccattgcgagg
cggacggtgcagtgcttcgccggaagaagcgatcgcagactcagtacagcaacggagatt
tcaaatgtttga
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