Musa acuminata (dessert banana): 135612000
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Entry
135612000 CDS
T03447
Name
(RefSeq) sister chromatid cohesion protein SCC2-like
KO
K06672
cohesin loading factor subunit SCC2
Organism
mus
Musa acuminata (dessert banana)
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mus03036
]
135612000
Chromosome and associated proteins [BR:
mus03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
135612000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
PDS5
PHD
zf-HC5HC2H_2
zf-HC5HC2H
HEAT_GCN1_C
PHD_2
COP9_hel_rpt
Motif
Other DBs
NCBI-GeneID:
135612000
NCBI-ProteinID:
XP_064963771
LinkDB
All DBs
Position
BXJ2-5:776728..799526
Genome browser
AA seq
1753 aa
AA seq
DB search
MEFNQDLGFERYCRLSNTTHSEIAPSLSLPSLPVCFGSFDQQLGLSDVPGGSRSGDRPDI
LAHAGTIAELLRNCDVDYLNLKENARVVPDDLGDRSRLYQEVVKYNPDAFKCFYRGPLQE
QRRSNQTIEKKPFGQGVSQVQRDNGGECDDRSEKNLITEPPSFASSRKPKIKKKESDSVP
SSVGPDLLDHQGIVGSFCEMAEDFCGRAEIPDDAEGAEVSSIPLTDIKTLLNQIMSIRSK
KVLQLIPLNTLVRLINILDRQIQCAQGLSIDGNDNADDDAANLVLCALESTHASLGIMAH
QDMPKQLYREEVIERILDFSRHQIMEIIAACNPLHSLPKPSENAPFDGDEEDDDDVDNTN
SSLAKRRRYNRNVNLRKSSGSKISAPVHAVVQKLCSILGFLKDLLSVERLSDSCILQLVK
TSFSTFLADNIQLLQLKSINLICGVYSSYTQHRSFLIDETLQLLRKLQFNKRAIRAYHLP
DEEQKQIQMITALLIQLVQFSSNLPESLKTAANWNAVLDISSDSSSPAKSYEAATQTCCL
FWTSVLQRLTTAKSQDVSESKMILENIIMDLLTTLNLPEYPASAPILEVLCVLLLQNAGL
KSKDISARCMAVDLLGMIAARLKRDAVTCSRDRFWILQDLVDANDDVSVGTKDACSVCLK
RRGANIICHLCKRCFHPDCLGISGQEMLLRDWSCHICLCKKQLITLHSYCNMQSKDNAKI
SLVSASTTSGDSDCVTKLEVVQQILLNHLQQNGSEDDVNLFTRWFYLCLWYKDDSQSQER
VIYYLARLKSKAILRDSGSSLLLSRDGAKKICLALGQNNSFSRGFDKILSLLLASLRENS
PVLRAKALRAVSAIVEADPEVLCDKRVQCAVEGRFCDSAISVREAALELVGRHIASHPGV
GLKYFEKVAERIKDTGVSVRKRSIRIIRDLCISESNFSEATRAFIEIISRVTDEESSVQD
LVCKTFFELWFEEPTGSQKHLIADGSSVPMEVAKKTEQIVDMLRNMPNSHHLVTVIKRNL
TLDFLPQSAKATGINAASLASVRKRCELICKRLLERILQVEEETSDKEEVCALPYVLALH
SFCVVDPTLCAPSTDQSQFVITLQPYLKNQVDNKSVAQLLESIIYVVNAVLPLLRKPPQS
VIEELEQDLKHMIVRHSFLTVVHACIKCLCSLSKIAGKGSSIVEYLIHIFFKHLQGSGSD
NMQLLGRSLFCLGLLLRYGGELIVKTDSQHVHIDKSLSLLKRYLVMDDFGLKVRALQALG
YILISSPEYMLEKDIGKILEASLASSADFRLKTQALQNLYEYLLDAETKMGTDCGSKNAT
SHAEDAGNKVPVAAGAGDTNICGGIVQLYWNSILERCLDGNDQIRQTSLKIVEIVLRQGL
VHPITCVPYLIALEIDPLDVNSKLAHHLLMNMNDKYPAFFESRLGDGLQMSFKFVQCIAS
NHNLVSGLQKGKSDGNPIAYVRPGISRIYRLIRGNRIARNKFIHSIVRKFESGGGNYLPI
GFLVYCTEILASLPFTCPDEPLYLIYDINRIIQVRAGALEANMKTWSSVSQHRDSLEMPS
EIDKGNANSGWPNISEHDFTEIADKMSDSSHGISTEDLQKFQADCHEAIALQLLLKLKRH
LKIVYGLNDARCQAFSLKELPKPGETISKQNIPFNISDTPISLPTSYQAMVEKYQEFKVS
LREDAIDYSTYTASVKRKRPTPRSSRGGKAAQRKGEEDDDDVDDEDWTGGPRVLDFSGQR
SNGMRMTRQRLQV
NT seq
5262 nt
NT seq
+upstream
nt +downstream
nt
atggagttcaaccaggacctgggattcgagcggtactgccgcctgtcgaacaccacccac
tcggagatcgctccttccttgtccctgccctcgctccccgtgtgctttgggtccttcgac
cagcagctcggcctctccgacgtgcccggagggtcccgctccggcgaccgcccggatatt
ctcgcgcacgcgggaacgatcgcggagctgcttaggaattgcgatgttgactacttaaat
ctcaaggaaaacgcgagagtcgttcctgatgacttgggggaccgttcgaggctctatcaa
gaagtcgtcaagtataaccccgatgcctttaagtgtttctatcgaggtcctcttcaggag
cagagaaggtctaatcaaacgatagaaaagaaaccctttggacaaggtgtttcccaagta
caaagggataatgggggtgaatgtgatgaccggtcagaaaagaacttgatcactgaacca
ccttcttttgcttcgtcaagaaaaccgaaaataaaaaagaaagaaagtgattctgttcca
tcatctgtggggccagatcttcttgaccatcaaggaatagttggaagcttttgtgagatg
gctgaagatttttgtgggagggcagagatacctgatgatgcggaaggtgcagaggtgtca
tctattccgctgactgatattaaaacacttctaaatcagataatgtctatacgttcaaag
aaagtcttgcagttaattccactcaacactcttgtgagactcataaatattttagatcgt
caaatacagtgtgcacaaggcctgtcgattgatggaaatgacaatgctgatgacgatgct
gcaaacttggtcctgtgtgctttggagtctactcatgcatcactgggaattatggcccat
caagatatgccaaagcagctatatagagaagaagtcattgaaagaattcttgatttctca
agacatcagatcatggaaatcatcgcagcatgtaatccattgcacagtcttcccaaacca
agtgaaaatgctccttttgatggtgatgaggaagatgatgatgatgtagataataccaat
agttcattagccaaaagaaggcgctataataggaatgtgaatctgaggaagtcttccgga
agcaaaatttcagcaccagtgcatgctgtggttcagaaactttgctcaattctaggcttt
ctcaaggatctattgtctgtggagcgactctcagatagttgcattctacagttggttaag
accagtttttcaactttcttggcagataacattcagctcttgcaattaaagtctataaat
ttaatatgtggggtgtattcttcatacactcagcaccggagtttcttgatagatgaaacc
ctgcagcttcttaggaagttacaattcaacaaacgggctattagagcttatcatctcccc
gatgaggaacaaaaacagattcagatgataacagctttgttgattcaattggtgcaattc
agtagcaatcttcctgaaagtttgaagacagcagcaaactggaatgcagttttagatata
tcatctgattcaagtagcccagctaaatcttatgaagctgcaactcaaacctgttgcctt
ttctggaccagtgttcttcagcgtttgaccactgcaaaatctcaagatgtatcagagtcg
aagatgatcttagagaatattatcatggatctgctgacgactttgaatttacctgaatat
cctgcttctgctccaatattggaggttctctgtgtcttgctgcttcaaaatgctggattg
aaatctaaagatatctcagcacgttgcatggctgttgaccttctaggaatgattgcagca
aggctgaaacgtgatgctgtgacttgcagcagggataggttctggatcctacaagatctg
gtcgatgcaaatgatgatgtttccgttggcacgaaagatgcatgctctgtttgtcttaaa
agaagaggtgccaacatcatctgtcatctctgcaagagatgctttcatcctgattgcttg
ggaatttcgggacaagaaatgttgcttcgggactggtcttgtcatatatgtctatgcaag
aagcagctaattactctgcattcatactgcaatatgcagagcaaggataatgctaagata
agcttagtttctgctagcaccacttctggagattctgactgtgtcactaaattggaagtt
gttcaacaaattcttttgaaccatctgcaacaaaatggttccgaagatgatgtgaatttg
tttactcgctggttttatctttgcttgtggtacaaggacgactctcaatctcaagaaagg
gttatttattatcttgctagactaaagtcaaaggccattttgcgggactctggtagttct
ttattgttgtcaagagatggggctaagaagatatgcttggcacttgggcaaaataattct
ttctctaggggatttgacaaaattctttcactgctcttggcaagcttgagggagaactct
ccagttttgcgagccaaggcattaagagcagtcagtgccatagttgaagctgatcctgag
gttttatgtgataaacgtgtccaatgtgctgttgaaggaaggttttgtgactctgcgatc
tcagttcgggaagctgctcttgaacttgttggcagacatattgcttctcatcctggagtt
ggtttgaagtattttgaaaaagttgctgaacggataaaggataccggagtcagtgtgcgc
aaacgttccattagaattatccgcgacttgtgtatttctgaatcaaacttctcagaagca
actcgtgcttttattgagatcatttctcgtgttaccgatgaggaatcaagcgtacaggat
ttagtatgcaaaacattctttgaactttggttcgaggaaccaactggaagtcagaagcac
ttgatagctgatggtagctctgtacctatggaagtagcaaagaagactgagcagattgtt
gatatgctgagaaatatgcctaacagtcatcatcttgttacagttataaagcgtaattta
acacttgattttcttccacaatcggctaaagctactgggataaatgcagcttctttggca
tctgtgcgtaaacgctgtgaattgatttgcaaacgtttattagaaagaatattgcaggta
gaggaggagactagtgataaagaggaagtttgtgcactcccatatgttcttgctttgcat
tcattttgcgttgtggatccaacactttgtgctccatccaccgatcaatcacaatttgtt
ataactcttcagccataccttaagaatcaggttgacaacaaatcagttgctcagctgctc
gaaagcataatatatgtagtcaatgctgttctgccattgcttcggaagccaccacagagt
gttattgaggaacttgaacaggaccttaagcacatgattgttcgccattctttcctgaca
gtcgttcatgcttgtatcaagtgcctttgttcgcttagtaaaattgctggcaaaggttca
agtattgtcgaatatttgattcacattttcttcaagcatttgcaaggttcaggttctgat
aatatgcagcttttgggtcgttcacttttctgccttgggcttcttctaaggtatggggga
gagctaatagttaagactgatagtcaacatgttcatattgacaagagtctctcattactg
aaaagatatcttgtcatggacgactttggcttaaaggttcgagctttacaggcattaggc
tatatattgatttctagtcctgagtatatgttggaaaaagacattgggaaaatattagag
gcctcactggcctctagtgctgatttcaggcttaagacgcaagcattgcaaaacctgtat
gaatatcttcttgatgcggaaaccaaaatgggtacagattgtggcagtaagaatgcaact
tcacatgctgaagatgctggaaacaaagtgcctgtagctgcaggtgcaggtgatactaat
atttgtggaggaattgttcagctttattggaacagtattcttgaaagatgcttggatgga
aatgaccaaattcgtcaaacttctctcaagattgtggaaattgtactacgtcaaggacta
gtccatcctattacgtgtgttccatacctcatagctcttgaaattgatccgctggatgtg
aattcaaaattggcccatcacttgttgatgaacatgaatgataagtatcctgcttttttt
gaaagccgtttgggtgatggccttcagatgtcatttaaatttgttcagtgcatagccagt
aatcataatttggtctcaggacttcaaaaaggtaaatctgatggtaatccgatagcatat
gtccggccaggtatatctcgtatatacaggcttattcgaggaaatcgtattgcaaggaac
aagttcattcactcaatagtgaggaaatttgagtctggtggtgggaattatttaccgatt
ggctttcttgtatattgcacagagattcttgcatctctccctttcacatgtcctgatgaa
cccctttacttgatatatgatataaatcgaataatacaagttagggcaggtgcactcgag
gcaaacatgaaaacctggagttctgtttcgcaacaccgggattcattggagatgcccagt
gaaattgacaaaggtaatgccaattctggttggcctaatatatctgagcatgatttcaca
gagattgcggacaagatgtcagacagctcacatggcatttcaacagaagacctgcagaag
tttcaggctgattgtcatgaggcaattgctctgcaactcctattgaagctgaaaaggcac
ttgaaaattgtgtatggtctaaatgatgccaggtgtcaggcgttttctttaaaggagctt
ccaaagcctggagagacgatttctaagcaaaacattcctttcaacattagtgacactcca
atcagtttgcctacatcctatcaagccatggttgaaaagtatcaggagttcaaggtatcg
ttgagagaagacgcaatagactattcaacatatacagctagtgtcaagaggaaacgccct
actccaagaagttccagaggcggaaaagctgctcaacgaaaaggtgaggaagatgatgac
gatgtggatgatgaagactggacaggtgggccacgcgtgcttgatttcagtggccaaagg
agtaatggtatgcggatgaccaggcaacggttgcaagtgtaa
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