Musa acuminata (dessert banana): 135612357
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Entry
135612357 CDS
T03447
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 6-like
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135612357
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mus03019
]
135612357
03036 Chromosome and associated proteins [BR:
mus03036
]
135612357
Enzymes [BR:
mus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
135612357
Messenger RNA biogenesis [BR:
mus03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
135612357
mRNA degradation factors
5'-3' decay
Decapping complex
135612357
Chromosome and associated proteins [BR:
mus03036
]
Eukaryotic type
Gene silencing
piRNA pathway
135612357
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Sirohm_synth_M
NA-iREase2
TFIIA
Motif
Other DBs
NCBI-GeneID:
135612357
NCBI-ProteinID:
XP_064964607
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All DBs
Position
BXJ2-5:8379401..8392687
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AA seq
498 aa
AA seq
DB search
MNPRGRFPPPGMGNGRGGGASTNPGFYARNPQQHQHQHQHQHQHQQQYVQRNPGNGQPNR
QFQHQHQQWSRRNWVGGDSGAGEVMKSVQSEATDSSLQDWKAQLKIPPADSRYKTEDVTA
TKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCI
PALEKIDQDCNAIQVVILVPTRELALQTSQVCKELGKHLRIQVMVSTGGTSLKDDIMRLY
QPVHLLVGTPGRILDLAKKGVCVLKDCSMLIMDEADKLLSPEFQPTIEQLIQFLPANRQI
LMFSATFPVTVKDFKDKYLPKPYIINLMDELTLKGITQYYAFVEERQKVHCLNTLFSKLQ
INQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDL
FTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAINLITYEDRFNLYRIEQEL
GAEIKQIPPQIDRTIYCT
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgaaccctagaggtagatttccgccgcccggcatgggcaatggccgagggggtggcgcg
agcacgaatcctggtttctatgcgagaaatcctcaacagcaccagcatcagcatcagcat
cagcatcagcatcagcagcagtatgtgcagcggaatccggggaatggccagccgaaccgg
caattccagcaccagcatcagcagtggtcgagaaggaattgggtaggaggtgactctggt
gctggcgaagtaatgaaatcggttcaatctgaggcgaccgactccagcttgcaagattgg
aaggcacaattgaagataccacctgctgactcacgttacaagacagaggatgtgactgca
actaaaggaaacgaatttgaggactattttctgaagcgggaacttcttatgggaatttat
gagaagggttttgaaaggccttcacctattcaggaagaaagcattcctattgcactcact
ggcagtgacattcttgccagagctaaaaatgggactgggaagacagctgcattttgtatt
cctgcacttgaaaaaattgaccaagattgcaacgctattcaagttgtcatattggttcca
acaagagagttagcgctacagacatcacaagtttgtaaggagcttggaaaacatttgagg
atccaggttatggttagtactggagggaccagtttgaaggatgacattatgcgtttatat
caacctgttcacctgcttgttggaacacctggtcgaatacttgaccttgcgaaaaaaggt
gtttgtgtcttgaaggattgttcaatgcttattatggatgaggctgacaaactactgtct
cctgagtttcaaccaacgatagagcagcttattcagtttcttcctgccaatcggcagatt
ttaatgttttcagcaacatttcctgtaacagtgaaagattttaaagacaaataccttcca
aaaccctatattatcaatctaatggatgaactgacactgaagggaataacacagtactat
gcttttgtcgaggaaagacagaaggtccactgcctgaatacccttttctcaaagcttcaa
attaaccagtctattattttctgtaactctgttaaccgagtggagctgttagcaaagaag
atcactgagcttggttattcctgcttctacatccatgctaaaatgctgcaagatcatagg
aatcgtgtttttcacgacttccgcaatggagcatgcaggaatcttgtttgcacagatcta
tttacaaggggaattgatattcaagctgtcaatgttgtcatcaattttgattttccaaag
aactctgaaacatatctgcacagggttggtcgttcaggccgatttggtcaccttggtttg
gccatcaatctgatcacctatgaggatcgctttaatctgtataggattgagcaagaactt
ggagcagaaataaaacagattccgccgcagattgatcgcactatatactgcacgtga
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