Musa acuminata (dessert banana): 135612431
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Entry
135612431 CDS
T03447
Name
(RefSeq) E3 ubiquitin-protein ligase UPL4-like isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
135612431
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mus04121
]
135612431
Enzymes [BR:
mus01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
135612431
Ubiquitin system [BR:
mus04121
]
Ubiquitin ligases (E3)
HECT type E3
135612431
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
Arm
HEAT_2
Motif
Other DBs
NCBI-GeneID:
135612431
NCBI-ProteinID:
XP_064964803
LinkDB
All DBs
Position
BXJ2-5:9876370..9886322
Genome browser
AA seq
1506 aa
AA seq
DB search
MDRNRKREAADERSQEKRACSSSEFRPCSSTSSSQPPPPPQTDSEMESSSSGRSDRAGDS
GYGSCDSDDFAGGYDSRNIVGRGRLQRVFSGLLDDGSGGSAQLAALTELCEVLSFCMEDA
VGYFPLETVVPPLVKLASHESSPDVMLLAIRALTYLCDAMPRSAEAIVRHGALPVLCGRL
LAIEYLDVAEQCLQALEKISRKQPVPCLQAGTIAAVLTYIDFFPTNPQRVAVSTVANVCK
KLPPDCSSIVMESVPILCSLLQYEDHKLVETVAACLVRITDCFAGSSELLDELCKHGIIQ
KSLNLIANDGHRSLSRATYSGLIGLLRKLATSSLVAVQTLFELNISRTLMGILMSSDMLR
DSAYVSVQDMQTNQVYEVLKLANQLIPPVLRDVPDDQIELAKEKILVDQPNFLHEFSTDI
LPVSVQVVNSGANAYVCYACVSIINSIAYFSTPDILLDSIKSTNISSFLAGLLSRKDPHV
IFLTLKTVEVLMQKLPAVFLSSFIKEGVVYAIDAALLVQEKCSDSVSEHSNDHMVVRDTS
RCMCHAFNSSRVSASESKTCRLQKDSIQSLARHIKTTYFTHEAVDSEMGFTETLQKLKIL
CTVLNDNVDSCSTSDGCLQNEENLTQILLQVMREFSEGESMSTFEFIESGIARFLACYLS
NGKHLSGTTSAIDLSSHILTVLKRFKIFSSICLSNPGQSWDNMLLAVLLKKFQNALSSLD
NFPVILSHGFKLRNTYTDIPVRGITKNPCLRVRFVRQNEDTNLSDLDNVVNVDISSSFDA
LEGYLWPKVNKGKNGHRTESADRKADDTTSGIKHVSEKNPIETHTNISQESCISNSAEVS
RQEEQYLPAVDSSPKQTMSAKEVTEGSSASPSIGSAKPKLTFSLRGKQLDSSMTIYQAVL
EEQKGAEFDMVVGSKFWSEVYKLTYRSAEEPKANNSEMLNCVPQSSVFWNKHGFSDWKYP
FLLAELPCKIDKLNASYDVLFMLKIFEGMNHYLFQLLSDERLNSFAEGRIENFDDLKVIV
SSIPQVEFVNSKLNDKLEQQMQDPLVLTTGCMPSWCGQLMAACPFLFSFEARRKYFYLTT
FGSLRSQQNNIQNLDGSGTNSLNDRHSYSGSLRKKFIVNRNNILESAVKMMKLHAQSKGT
LEVEYAEEVGTGLGPTMEFFTLASHEFQKVGLGMWRGDLSYAGRSTIDGYSEFVLAPFGL
FPRPWSTSTDVSGVAEFPEVIKMFLLLGKLVAKAIKDGRILDIPFSRAFYKIILEQELSI
CDIQSIDPELGRTMLEFQALVNRKRFLESISGDSSNLCYRNTSVKDLCLDFTLPGFPDYA
LLSESTKMVNIVNLEEYVTMVVDATIGSGISRQIDAFKSGFNEVFSLKALQIFTKDELER
LLCGEQDCWDFTELVDHINFDHGYTGSSPTVVSFLEIIQELEREQRRAFLQFVTGSPRLP
PGGLAALKPKLTVVRKQHSSCDADMDLPSVMTCANYLKLPPYSSKEKMRHKLLYAITEGQ
GSFHLS
NT seq
4521 nt
NT seq
+upstream
nt +downstream
nt
atggatcgaaatcggaagcgcgaggccgctgacgagcggtcgcaggagaagcgggcgtgc
agctcgtccgagttccgtccctgctcctccacctcttcctcccagccgcccccccctccg
cagacggatagcgagatggagtcgtcctcgtccgggaggtccgatcgggccggggactct
ggctacggctcatgcgactccgacgatttcgctgggggatacgactcccgaaacattgtg
gggcgggggaggctgcagagggtcttctccggcctcctcgatgacggctctgggggctcg
gcgcagctggcggcgctgaccgagctctgcgaggtgctctctttctgcatggaggatgcc
gtcgggtacttcccgctggagacggtcgtgccgccgctcgtgaagcttgccagccacgag
agcagccccgacgtcatgcttttggccataagagcgctcacgtacctctgtgacgcgatg
ccgaggtcggccgaagccattgtccggcatggagcactgcctgtcctctgcgggaggctg
ttggcgatcgaatacttggacgtggcagagcagtgcttacaagcattggaaaagatatcg
cggaagcaaccagttccatgcttgcaagctggaacaatcgctgctgtcttaacttacatt
gatttctttccaacgaatcctcagcgagtggcggtttcaactgtagcgaacgtgtgcaag
aagcttcctcctgattgctcttcgattgtcatggaatctgttcctattctgtgctctctt
ctccaatatgaggatcataagctggtagaaactgttgctgcttgtctggtaaggataacg
gattgtttcgctggttcctccgaattgctggatgaactctgcaagcatgggattatacag
aagtcgctgaatttgattgctaatgatggtcatagatcacttagccgggcaacttattct
ggtttgattggtcttctcaggaagcttgccactagctcccttgtggcagttcagactctc
ttcgagcttaatataagtcgcactttgatgggcatcttgatgagttctgacatgttacgt
gattctgcttacgtgtctgttcaagatatgcaaaccaatcaggtatatgaagttcttaag
ttagctaatcagttgatcccaccagtattaagagatgttccagatgatcagatagaacta
gccaaggagaagattctagtagatcaacctaatttcttgcatgagttttccacggacatt
cttcctgtctctgttcaggtggtgaattctggtgcaaatgcatacgtatgttatgcctgt
gtttcaattataaacagtattgcctatttcagcacacctgacattcttctagactcaatc
aaaagtacaaacatctcaagttttttggcaggacttttgtcccggaaagatccacacgtg
atatttttgacactgaagactgttgaggttctgatgcaaaaacttcctgctgtcttctta
agctcttttattaaggagggggtagtttatgcaattgacgctgcacttttagtgcaagag
aaatgctcagattctgtatcggaacactccaatgatcacatggttgtaagagatacttcg
agatgtatgtgccatgcttttaattcatctagggtttcagcctctgaatcaaaaacatgc
aggcttcaaaaagatagtattcaaagtttggcaaggcacataaagactacctactttacc
catgaagcagtggattctgagatgggctttacagaaactcttcaaaaactcaaaatcttg
tgcacggtattaaatgataatgtggatagttgttccactagtgatggttgccttcaaaat
gaagagaacctgactcaaatattacttcaagtcatgagagagttctctgagggagagtct
atgtctacctttgagttcattgagagtggtattgcaagatttctggcttgttatttatcg
aatggcaagcatctatcgggaactaccagtgctattgacttatcaagtcacattcttact
gtactgaagagatttaagatattttcttccatttgcttatcaaatcctggtcagagttgg
gataacatgcttttggcagtattattgaagaaatttcagaatgcattgtcttctttggat
aattttcctgttattctaagccatggtttcaagctgagaaacacttatacagatatccct
gtcagaggcatcactaagaatccctgtttaagagtacgttttgtgcgtcaaaatgaggat
acaaacttatctgacttggacaatgtcgtaaatgttgatatttcttcatcctttgatgct
ttagaaggatatctttggccgaaagttaacaaaggcaagaatggacatcggacagagtct
gcagataggaaagcagatgacactacttcagggataaaacatgtctcagaaaagaatcct
atagagacacacacaaacatctcacaggagtcatgtatttccaactctgcagaggtaagc
aggcaagaagaacaatatttacctgcagtagacagtagtccaaaacagactatgtctgcc
aaggaagtcactgaaggaagttcagcatctccaagcattggaagtgcaaaaccaaagtta
actttcagtttaagagggaaacaacttgattcctcgatgaccatttatcaagcagttctt
gaagaacagaaaggtgcagaatttgatatggttgtgggatcaaagttctggagtgaagtg
tacaaattaacctatagaagtgcggaagaaccaaaagcaaataatagtgaaatgcttaat
tgtgttcctcagtcatctgtcttttggaataaacatggattctcagattggaagtatcct
tttctgctagctgagcttccgtgtaaaatcgataaattgaatgcctcgtatgatgtcttg
tttatgttgaagattttcgagggaatgaatcactatttgtttcaactgttgagcgatgag
agactcaattcttttgccgaagggagaatagagaactttgatgatctgaaggtgatagtt
tcttcaattccacaggttgagtttgtgaacagtaaattaaatgataagttggagcaacaa
atgcaagacccgttggtattaaccactggttgcatgccgtcatggtgtggccagttaatg
gctgcatgccctttcttattttcttttgaggcaagacggaagtacttctaccttacaaca
tttggttctttaagaagtcagcagaataacatacagaacttagatggtagtggtaccaac
tccttaaatgatcgacattcatattcaggttctttacgtaagaagttcatagtcaatcgc
aacaatattcttgaaagtgctgtgaaaatgatgaaattacatgctcaaagtaagggaact
cttgaagtggaatatgctgaggaagtgggtactggcctaggtcccacaatggagttcttt
acattagcaagtcacgaatttcaaaaggttggattgggtatgtggagaggggatcttagt
tatgcaggaagaagtaccattgatggttattctgaatttgtgctagctccctttggacta
tttcctcgtccatggtcaacatcaacagatgtctcgggtgttgctgaatttcctgaagtg
attaaaatgtttcttcttctcgggaagcttgtggcgaaggcaattaaagatgggaggatc
ctagatataccattttctagggccttctacaagattatacttgagcaggagctcagtata
tgtgatatccagtcaattgatccagaacttggaaggactatgttggagtttcaagctctt
gtcaataggaaaagatttttggaatcaatttctggagactcttcaaatttatgttacagg
aataccagtgttaaggatctttgtcttgatttcactcttcctggcttccctgattatgca
cttctatcagagagtacaaaaatggtgaatattgttaacttggaagaatatgtcacaatg
gttgttgatgcaacaattggcagtgggatttcaaggcaaattgatgctttcaaatctgga
tttaatgaggtgttctctttaaaagctcttcaaatttttaccaaagacgagctggaacgg
ttgctctgtggagaacaagattgttgggatttcactgagctcgtcgatcacatcaacttc
gatcatggttatacgggaagcagccctactgtagttagttttctagaaatcatacaagag
cttgagcgagaacagcgtagggctttcttgcaatttgttacgggctctcctcgtctccca
cctggaggcttagctgcactcaaaccaaagctgacagtggttcgtaagcagcacagtagt
tgtgatgccgatatggacttgccgagcgtcatgacttgcgctaattatctaaagctccca
ccttactcttctaaggagaagatgagacataaattgctttacgcgataacagaaggtcag
gggtcatttcacctctcgtag
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integrated database retrieval system
