Musa acuminata (dessert banana): 135612470
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Entry
135612470 CDS
T03447
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 37-like
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
mus
Musa acuminata (dessert banana)
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mus03019
]
135612470
03041 Spliceosome [BR:
mus03041
]
135612470
03036 Chromosome and associated proteins [BR:
mus03036
]
135612470
Enzymes [BR:
mus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
135612470
Messenger RNA biogenesis [BR:
mus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
135612470
mRNA cycle factors
Common to processing body (P body) and stress granule
135612470
Spliceosome [BR:
mus03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
135612470
Chromosome and associated proteins [BR:
mus03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
135612470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
135612470
NCBI-ProteinID:
XP_064964878
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All DBs
Position
BXJ2-5:10480888..10495744
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AA seq
632 aa
AA seq
DB search
MRTSWADSVANAESSAFATGASASTTNTNAADATAAAVVSAPRPPRAAYVPPHVRNRAAS
SELPASPSADSSSAAKFAPGPGASSGGSRWGGGTSRDLGRTGSGGGGRSVGGGWGSRSGG
WDGRVREVNPFVNEEETTEVAFDGQENTGINFDAYEDIPVETSGDNVPPPVSTFAEIDLG
DAVNENIRRCKYVKPTPVQRHAIPILLAGRDLMACAQTGSGKTAAFCFPIISGIMRGPPS
QRQRGSRTVCPPALILSPTRELSIQIHEEARKFSYQTGVRAVVAYGGAPINQQLRDLERG
VDILVATPGRLVDLLERARVSLQNIRYLALDEADRMLDMGFEPQIRRIVEQMDMPPRGER
QTMLFSATFPREIQRLASDFLFNYIFLAVGRVGSSTELIVQRVEFVLEPDKRSYLMDLLH
AQKVNGAYGKQALTLVFVETKKGADSLEHWLSMHGFPATTIHGDRTQQERERALRSFKSG
ATPILVATDVAARGLDIPHVSHVINFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNS
SLARPLAELMQESSQEVPDWLSRYATTRSSYGGRNRRSGGARFGGRDFRRDSSTRSGGSE
YYGGGNGYGGGSYAASGYGGGYGNQGLTSAWD
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgcgaacttcatgggctgattctgttgcgaacgccgagagctcggcgtttgcgaccggt
gcttctgctagcaccaccaacaccaacgctgccgacgccactgctgctgctgttgtttct
gcccctcgccctcctcgtgctgcctatgtccctcctcatgttcgcaaccgcgcggcatct
tcggaacttccggcgtcgccttccgccgatagttcttccgctgctaaatttgcacctggg
cccggtgcatcttctggaggaagccgttggggtggtggcaccagccgagacttgggacgc
actggctctggtggtggtggccggagcgtgggcggtggttggggctcaaggagcggtggg
tgggatgggagggtgcgagaggtcaaccctttcgtgaacgaggaagaaaccactgaggtt
gcttttgatggtcaggagaatactgggataaattttgatgcttatgaagacatccctgtg
gagaccagtggtgacaatgtgcctccgccagtgagcacatttgctgagattgatttgggg
gatgcagtgaatgaaaacatcaggaggtgcaagtatgtgaagccaacaccagtccagcgc
catgcaattcctatcttgctcgcggggcgtgacctgatggcctgtgctcagactgggtcg
ggaaagacagcagctttctgcttcccaatcattagtgggattatgaggggaccaccttca
cagcggcagcggggctcgaggacagtgtgtccacctgcgctgattttgtctcctacccga
gagctttctatccaaatacatgaggaagctaggaagttctcataccaaactggtgttagg
gctgttgttgcctatggtggagctccaatcaatcaacagttgcgggacttggaaagggga
gttgacattcttgttgcgactcctggtcgcctggttgacttgcttgagagggccagagtc
tctttacaaaatatcagatatttagccctggatgaggctgataggatgcttgatatgggt
tttgagcctcaaattcgaagaattgttgaacaaatggacatgcctccacgtggtgaaaga
cagaccatgttattcagtgccacatttcctagagagatacagaggttggcttctgatttc
cttttcaattacatctttcttgctgttggaagggttggttctagtactgaactgattgtt
cagagagtagagtttgttcttgagccagacaaaagaagctacctaatggacctccttcat
gcccaaaaggttaatggtgcctatggaaagcaagctctaactttggtctttgtggagaca
aagaaaggtgctgattcgttggaacattggttatccatgcatgggtttcctgcaactacc
attcatggtgataggacacaacaggaacgggaacgagcactgagatccttcaagagtggt
gcaactccaattctagtagcaactgatgttgctgcccgtgggctcgacatcccccatgtg
tcacatgttatcaactttgacctccccaatgacattgatgactatgttcaccgcattggt
aggactgggagagctggaaagagtggtctagccaccgcattcttcaatgagaataattca
tctttagccaggccattggcagagcttatgcaggaatcaagccaggaggtgccagattgg
ctttctcgctatgcaaccactcggtcttcatatggtggtagaaaccgtcgatcaggtgga
gcacgatttggaggccgtgactttcgaagagattcctctaccaggagtggaggcagtgag
tattatggtggaggcaatgggtatggaggtgggtcatatgcggcatcagggtatggaggt
ggttatggcaatcaagggttgactagtgcttgggattag
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