Musa acuminata (dessert banana): 135612495
Help
Entry
135612495 CDS
T03447
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
135612495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mus03019
]
135612495
03009 Ribosome biogenesis [BR:
mus03009
]
135612495
04131 Membrane trafficking [BR:
mus04131
]
135612495
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mus04147
]
135612495
Messenger RNA biogenesis [BR:
mus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
135612495
Ribosome biogenesis [BR:
mus03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
135612495
Membrane trafficking [BR:
mus04131
]
SNARE
SNARE associated proteins
Others
135612495
Autophagy
Aggrephagy
Other aggrephagy associated proteins
135612495
Exosome [BR:
mus04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
135612495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_2
AAA_5
AAA_33
AAA_22
AAA_14
TIP49
NPHP3_N
RNA_helicase
nSTAND3
AAA_28
Mg_chelatase
AAA_17
ATPase_2
AAA_18
Parvo_NS1
IstB_IS21
ABC_tran
Vps4_C
Viral_helicase1
AAA_7
NACHT
AAA_24
NB-ARC
AAA_lid_PRS2_C
TsaE
DUF815
Zeta_toxin
Zot
Motif
Other DBs
NCBI-GeneID:
135612495
NCBI-ProteinID:
XP_064964940
LinkDB
All DBs
Position
BXJ2-5:11152534..11159981
Genome browser
AA seq
809 aa
AA seq
DB search
MANKGDASSSDPKGKKDYSTAILEKKKAPNRLIVDEAVNDDNSVVSMNPETMEKLQLFRG
DTILLKGKKRRDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCQDVKYGKRV
HILPIDDTIEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPAEYC
VVAPDTEIFCEGEPIKREDEDRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGV
KPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEK
NAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRSHVIVIGATNRPNSIDP
ALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVDLERIAKDTHGYVGADLAALC
TEAALQCIREKMDIIDLEDESIDAEILNSMAVTNEHFKTALGSSNPSALRETVVEVPNVS
WEDIGGLDNVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANEC
QANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGG
AADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEASRFQ
IFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIEREKRKSE
NPEAMEEDETDEVAEIKAAHFEESMKFARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFS
ERSESAAGGAGADPFATSAGAADDDDLYS
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacaagggcgatgcctcctcttccgatcctaagggtaagaaagattatagcacg
gcgatcctcgagaagaagaaggcccctaaccgtttgatcgtggatgaggcggttaatgat
gataattcggtggtctcgatgaatcccgagacgatggagaaactacagctctttcgaggc
gatactatactcttgaagggaaagaaaaggagggacactatttgtattgctctagccgat
gatacttgtgatgaaccaaagatcaggatgaacaaggttgttagatctaacctcagagtg
aggcttggggatgttgtttcagtccatcaatgccaagacgtcaagtatgggaagagggtt
cacatcttgcctatcgatgacacaatcgaaggagtcacggggaatctgtttgatgcttat
ttgaagccatattttcttgaggcatatcgtcctgtgagaaaaggggatcttttccttgtt
aggggaggtatgaggagtgttgaatttaaggttatagaaactgatcctgcagagtattgt
gttgttgctcctgacacagagattttctgtgagggggagcctataaaaagggaggatgag
gatagacttgatgaggtgggctatgatgatgttggaggagttagaaaacagatggctcag
ataagagagctagtggaactacctcttagacaccctcaattgtttaagtcaattggtgtc
aagccaccaaaaggtattttgttgtatgggccacctggttctgggaagacactgatagct
agagcagtcgcaaatgagacaggagcctttttcttctgcattaatggcccagaaattatg
tcaaaactagctggtgaaagcgagagcaatctgaggaaggcttttgaagaggcagagaag
aatgcaccatcaattatatttattgatgagattgattctattgctcctaagagagaaaaa
actcatggggaagttgagaggcgtatagtgtctcaacttctgacgctgatggatgggctg
aaatctcgttctcatgtaattgttattggggctacaaacaggccaaacagtattgatcca
gctcttagaagatttggtaggtttgacagggaaattgacattggtgtcccagatgaagtt
gggcgtttggaagttcttcggatccatacaaagaacatgaagctggctgaagatgttgat
ttagaaaggattgctaaggacactcatggatatgtaggggctgaccttgctgctctatgc
actgaagcggccctccagtgtatacgtgaaaagatggacataattgatttagaggatgaa
tcaattgacgcggagattctcaactctatggctgtcacaaatgaacattttaagactgct
cttggatcaagcaatccatctgcactccgtgaaactgtcgttgaagtgccaaatgtctcc
tgggaagatattggtggattggacaacgtcaagagagaactgcaagagactgtgcaatat
ccagttgagcatcctgagaagtttgagaagtttgggatgtccccctcaaagggagtattg
ttttatgggccacctggttgtggaaagaccttattagctaaggccattgctaatgaatgt
caagcaaacttcattagtgttaagggccctgaactactaactatgtggttcggtgagagt
gaagcaaacgtacgggagatctttgataaggctcgtcaatctgcaccatgtgttctcttt
tttgatgagcttgactccattgcaacccagagaggtagcagtgttggtgatgcaggaggt
gctgctgacagggttctcaatcagttacttacagagatggatggcatgaatgccaagaaa
actgtgtttattattggggcaaccaataggcctgacattattgatcctgctttacttagg
ccaggccgtctggaccaattgatttatattcctttaccagatgaggcctctcgttttcaa
atttttaaagcttgcctgagaaaatctccagtatcaaaagatgttgacctgagggctctt
gccaagtacactcaaggatttagtggggctgatattacagaaatttgccagcgtgcatgc
aagtatgccattagagagaacattgaaaaggatattgaaagagagaagaggaagagtgag
aatcctgaagcaatggaagaagatgagactgatgaagtagcagagatcaaagctgctcac
tttgaagaatcgatgaagtttgctcgtaggagtgtcagtgatgcagatattcggaagtac
caagcttttgcacagactttgcagcagtcaagggggttcggcagcgagttccgcttttca
gagcgatctgagtccgctgctggaggtgcaggagcagatccttttgcaacatcagctggt
gctgccgacgatgatgatttatacagttaa
DBGET
integrated database retrieval system
