Musa acuminata (dessert banana): 135614402
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Entry
135614402 CDS
T03447
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
135614402
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mus01009
]
135614402
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mus03019
]
135614402
03036 Chromosome and associated proteins [BR:
mus03036
]
135614402
Protein phosphatases and associated proteins [BR:
mus01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
135614402
Messenger RNA biogenesis [BR:
mus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
135614402
Chromosome and associated proteins [BR:
mus03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
135614402
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
ComGF
Motif
Other DBs
NCBI-GeneID:
135614402
NCBI-ProteinID:
XP_064967823
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All DBs
Position
BXJ2-6:5515359..5529145
Genome browser
AA seq
515 aa
AA seq
DB search
MGNGAEDAGPPVGSSPPPPLEWKFSQVFGERAAGEEVQEVDIISAIEFDKSGDHLATGDR
GGRVVLFERTDVRNLGSRKDLEAQDYPISRHPEFRYKTEFQSHEPEFDYLKSLEIEEKIN
KIKWCQAANHVLFLLSTNDKTIKYWKVQEKKVKKISEMNVDASQAVQNDNIASSSTISPR
GYLPNGRCPERPHGQLNNDLSMPPGGFPSLRLPVVVTSQETSLIARCRRTYAHAHDYHIN
SISNNSDGETFISADDLRINLWNLEICNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNM
LAYSSSKGSIRLIDLRQSALCDNHSKMFEEHEAPGSRSFFTEIIASISDVKFAKDGRHIL
SRDYMTLKLWDINMESGPVATFQVHEYLRPKLCDLYENDSIFDKFDCCLSGDGLHVATGS
YSNLFRVFGCIPGSNEATTLEASKNPMRRQVQTPSRPAKSLGSFARVVRRGAESPGVEAN
GNSYDFTTKLLHLAWHPTESSIACAAMNSLYMYSA
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggggaacggcgccgaggacgcgggcccgccggtggggtcatccccgccgccgccgctc
gagtggaagttttctcaggttttcggagagcgggcggctggggaggaggtccaggaagtt
gatattatttcagccattgaatttgataaatctggtgaccatcttgccaccggagatcga
ggtggacgtgttgttttatttgaaaggacagatgttaggaatcttggctcccggaaggac
ctggaggcgcaagattatccaattagtaggcaccctgagttccgctacaaaaccgagttt
caaagccatgaaccagagtttgactatctaaaaagcttggaaatagaggagaagatcaat
aagatcaaatggtgtcaagcagccaatcatgttctttttcttctttctactaatgacaag
acaattaaatactggaaggtgcaggaaaagaaagtcaagaagatctctgagatgaatgtg
gatgcttctcaagctgtacaaaatgacaacattgctagctcaagtacgattagtcctaga
ggatatcttccaaatggcagatgtccagaaaggccccatggtcagttgaataatgacttg
tccatgcctcctggagggtttccatcactacgtctgccagtggtagtgacaagccaagag
acaagtctcattgccagatgtagaaggacatatgctcatgctcatgattaccatataaat
tccatttcaaataacagtgatggtgaaacattcatatcagctgatgatctgagaataaat
ctttggaatttggagatctgcaatcaaagctttaatattgttgatgtgaagcctgcaaat
atggaggatttaactgaggttataacatctgctgagtttcatccaacccattgtaacatg
ctggcatatagtagttcaaagggttcaatccgtcttatagacttgcggcagtcggctttg
tgtgataaccattctaaaatgtttgaggagcacgaggcacctggctcaagatcttttttc
acagagatcattgcctcaatttcagatgttaaattcgcaaaggatggaaggcacatcctt
agtcgtgattatatgactcttaagctgtgggacatcaatatggagtcgggtcctgttgct
acttttcaggtccatgagtacttaaggcctaagctatgtgatctatatgagaatgattct
atttttgacaaattcgattgctgcctaagtggtgatgggttgcatgtggcaactggttct
tatagcaatctttttcgtgtgtttggctgtattcctggaagtaatgaagcaacaactctg
gaggccagtaaaaatccaatgaggcgacaagtgcagaccccctcaaggcctgcaaaatct
ctgggcagctttgcccgtgttgtcagacgaggagcagaaagcccaggagttgaagctaat
ggaaattcatatgatttcacaaccaaattactccatttagcttggcacccaactgaaagt
tcaattgcctgtgccgctatgaacagtttgtatatgtattctgcatga
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integrated database retrieval system
