Musa acuminata (dessert banana): 135614783
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Entry
135614783 CDS
T03447
Name
(RefSeq) DNA mismatch repair protein MSH2-like
KO
K08735
DNA mismatch repair protein MSH2
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
135614783
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mus03400
]
135614783
DNA repair and recombination proteins [BR:
mus03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
135614783
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
ATG17_like
Motif
Other DBs
NCBI-GeneID:
135614783
NCBI-ProteinID:
XP_064968587
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Position
BXJ2-6:complement(11050220..11064675)
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AA seq
942 aa
AA seq
DB search
MTASDSPAANKLPELKLDARQAQGFISFFKALPADPRAVRFFDRRDYYTVHGENATFIAR
TYYHTTTALRQLGSGSEGISSVSVNKNMFEAIARDLLLERTDHTLELYEGSGSNWNLTKT
GTPGNVGSFEDILFANNDMQDSPVTVALFPVFRENQCTVGLGFVDMTKRKLGTVEFLDDS
QFTNTESVLIALGCKECLLPVECGRSTELKPLYNSLSRCNVLLTERKKSEFKSRDLVQDL
GRIIRGSVEPVRDLLSGFDYALGALGALISYVELLADDSNYGNFTIEKYNLDNYMRLDYA
AMRALNVLESKTDLNKNFSLFGLMNRTCTAGMGKRLLNRWLKQPLLDVHEIIHRLDLVQA
FVEDPELRQGLRQHLKRISDIERLTHALKKKTANLPPVIKLYQSSIRLPYIRDVLEHYEG
QFSSLIRKRYSEPLNFWMDEERLNKFIALVEVSVDLDQLENGEYMISPGYDPNLAALKNE
LTAIEQQINDLHKQAANDLDLSLDKALKLEKGTQFGHAFRITKKEEQKVRKKLTNHYIVL
ETRKDGIKFTNTKLKKLGDQYQKLLSDYTSCQKGIVARVVDTSATFSEVFEAVAAILAEI
DVLLSFADLATSSPIPYVRPDITPSDQGDIILEGSRHPCVEAQDGVNFIPNDCKLVRGKS
WFQIITGPNMGGKSTFIRQVGVNVLMAQVGCFVPCERATISIRDCIFARVGAGDCQLRGV
STFMQEMLETASILKGASEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVTRAPTLFAT
HFHELTSLAHANAHDCPNLSSVGVANYHVGAHIDPSSRKLTMMYKVEPGACDQSFGIHVA
ELANFPEDVVNLARRKAEELEDFSQPSNISDGSEKEVGCKRKRVCNPDDMSSGAARAHRF
LEEFSALPLDQMDLKQAMEHVCKLRNELEKDAANSPWLKQFF
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgacggctagcgattcgccggcagccaacaaattgcccgagctcaaattagatgccagg
caggcgcagggtttcatatctttcttcaaagcccttcccgctgatcccagggccgtgcgc
ttctttgatcgccgggattattatactgttcatggtgaaaatgctacatttattgcaagg
acatattaccacacaactactgctttgagacaattaggtagtggttcagagggaatttct
agtgttagtgtaaataaaaacatgtttgaggctattgctcgtgatcttttgctggagagg
acagatcacacattagagctatatgaaggaagtggatcaaactggaatttgacgaaaaca
ggaacacctggaaatgttggtagttttgaagatattttgtttgccaacaatgacatgcag
gattccccagttacagttgcattgtttcctgtcttccgtgaaaatcagtgcactgtggga
ctaggttttgtggatatgaccaaaaggaaactcggtacagttgagttccttgatgatagc
caatttacaaatactgaatcagttttgattgctcttggttgtaaggaatgccttttaccc
gtggaatgtggaaggtcaacagaacttaaacctctttataattcactgtccagatgtaat
gttcttcttacagagagaaagaaatctgagttcaagtcaagagatttggtgcaggatctt
ggtaggatcatcagagggtcagttgaacccgttcgagatttgctttctggatttgattat
gcactgggtgccctaggggcattgatatcctatgtggaattgcttgcagatgatagcaac
tatggaaactttaccattgaaaagtacaatttagataattacatgagattagattatgct
gccatgagagcactaaatgtccttgagagcaaaacagatttaaataaaaactttagtttg
tttggtctgatgaatagaacatgtactgctggcatgggcaaacggttgcttaataggtgg
ctcaagcaaccattgcttgatgtacatgagatcattcataggttagatttggttcaggca
tttgtggaggatccagagcttcgccaagggttaaggcaacatctgaagagaatttcagat
attgaacgattgacacatgctctgaagaaaaaaacagctaatttgccaccagtcataaaa
ttgtatcagtcaagcatcagactgccatacatccgagatgtgctggagcattatgaagga
caattttcatcactgataaggaaaaggtattcagagcccttaaatttttggatggatgag
gaaaggttaaataagttcattgctcttgttgaagtctctgttgatcttgatcaacttgag
aatggcgaatacatgatatcacctggttatgatccaaacttagctgcactgaagaatgag
ctcactgccatagaacaacaaataaatgacttgcataaacaagcagcaaatgatcttgat
ctttctcttgataaggcattgaagttggagaaaggaacacagtttggacatgcttttagg
atcacaaagaaagaggaacaaaaggtaagaaaaaagcttactaaccattatattgtccta
gaaacacggaaggatggtataaaatttacaaataccaagttaaagaagttgggagatcag
taccaaaaattactgagtgattacacgagttgccagaaagggattgttgctcgagtagtt
gatacttcagctactttttctgaggtatttgaagctgttgcagcaattctagctgagata
gatgttctgctgagctttgctgacttggcaaccagttctcctattccatatgttagaccg
gatattactccctcggatcaaggggatattatactagaaggaagcagacatccttgtgtg
gaggctcaggatggtgtgaatttcattcctaatgattgtaaactcgtccgtggaaagagc
tggtttcagatcataacaggacctaatatgggtggcaaatcaacatttatacgacaggtt
ggtgtcaatgtattgatggcacaagttggttgctttgttccatgtgagagggcaaccata
agcatacgtgattgtatctttgctcgtgttggggctggtgattgccagcttcgtggcgtt
tccaccttcatgcaagaaatgctggagactgcttcaatcttaaagggcgcatctgagaag
tcactaataattattgatgagttaggccgtggaacatcaacttacgatggatttggcttg
gcttgggctatttgtgagcatcttgtggaggttactagggcgccaactctgtttgcaact
cacttccatgaactcacgtcactagctcatgcaaatgctcatgattgtccaaatctgtcc
tccgttggagtagcaaattatcatgttggagcgcacatagatccatcaagtcggaagttg
actatgatgtacaaggttgaacctggtgcttgtgatcaaagttttggtattcatgtggca
gaacttgcaaattttcctgaagacgttgtaaatcttgctagaaggaaagctgaggaactg
gaagatttttctcagccatctaacattagtgatggttcagagaaagaggtcgggtgtaaa
cgtaagcgagtatgtaatcctgatgacatgtctagtggtgcagctcgagctcatcgcttt
ctggaggagttctctgccttgcctttagatcagatggacttgaaacaggccatggaacat
gtttgtaaactgaggaatgaactggagaaagacgcagccaactctccatggcttaaacag
ttcttctga
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